Os02g0581700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0581700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 335.62 | 0.861 | 3.21 | -0.0615 | 0.211 | 1.28 | -0.241 | 2.09 | -0.156 | 20.8 | 0.4224 | 4260 | -- | -- |
| 337.73 | 0.856 | 3.2 | 0.216 | 0.213 | 1.04 | -0.611 | -- | -0.147 | 20.8 | 0.6661 | 2820 | -- | -- |
| 335.74 | 0.853 | 3.21 | -0.0819 | 0.213 | 1.34 | -- | 2.33 | -0.165 | 20.5 | 0.3612 | 4260 | -- | -- |
| 337.99 | 0.856 | 3.2 | 0.215 | 0.222 | 0.993 | -- | -- | -0.146 | 20 | 0.8293 | 2821 | -- | -- |
| 337.56 | 0.856 | 3.21 | -0.0982 | -- | 1.29 | -- | 2.28 | -0.172 | -- | 0.3454 | 4293 | -- | -- |
| 350.39 | 0.878 | 3.19 | -0.031 | 0.131 | -- | -0.381 | -- | -0.25 | 20.2 | -- | -- | -- | -- |
| 350.5 | 0.877 | 3.19 | -0.0167 | 0.157 | -- | -- | -- | -0.248 | 18.3 | -- | -- | -- | -- |
| 339.54 | 0.858 | 3.19 | 0.246 | -- | 1.02 | -- | -- | -0.123 | -- | 0.5621 | 2866 | -- | -- |
| 339.03 | 0.858 | 3.2 | -- | 0.21 | 0.916 | -- | -- | -0.162 | 20.1 | 1.17 | 2828 | -- | -- |
| 351.78 | 0.876 | 3.19 | -0.0209 | -- | -- | -- | -- | -0.251 | -- | -- | -- | -- | -- |
| 350.51 | 0.876 | 3.19 | -- | 0.157 | -- | -- | -- | -0.246 | 18.3 | -- | -- | -- | -- |
| 340.1 | 0.859 | 3.16 | -- | -- | 0.91 | -- | -- | -0.127 | -- | 1.13 | 2866 | -- | -- |
| 351.79 | 0.875 | 3.19 | -- | -- | -- | -- | -- | -0.249 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 324.84 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 3 |
| 3 | 325.66 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 2 |
| 7 | 325.82 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 10 | 325.89 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 13 |
| 15 | 326.80 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 11 |
| 17 | 326.93 | temperature | 20.0 | 90 | < th | dose independent | rect. | 5 | 7 |
| 19 | 326.94 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 11 |
| 22 | 326.97 | temperature | 20.0 | 10 | < th | dose independent | rect. | 6 | 6 |
| 36 | 327.89 | temperature | 20.0 | 90 | > th | dose independent | sin | 1 | NA |
| 38 | 328.52 | temperature | 20.0 | 90 | < th | dose independent | sin | 1 | NA |
| 41 | 328.84 | temperature | 20.0 | 10 | > th | dose independent | sin | 0 | NA |
| 55 | 329.17 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 8 |
| 61 | 329.29 | temperature | 20.0 | 10 | < th | dose independent | sin | 1 | NA |
| 63 | 329.33 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 12 |
| 70 | 329.65 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 6 |
| 86 | 329.92 | temperature | 20.0 | 10 | > th | dose independent | rect. | 3 | 14 |
| 115 | 330.26 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 127 | 330.35 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 137 | 330.55 | humidity | 80.0 | 270 | < th | dose dependent | rect. | 4 | 3 |
| 143 | 330.72 | humidity | 80.0 | 270 | < th | dose independent | rect. | 4 | 3 |
| 145 | 330.80 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 15 |
| 149 | 330.90 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 8 | 8 |
| 153 | 330.98 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 9 | 7 |
| 158 | 331.01 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 11 | 5 |
| 162 | 331.10 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 11 | 5 |
| 170 | 331.21 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 172 | 331.21 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 180 | 331.38 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 12 | 2 |
| 269 | 332.02 | wind | 5.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 271 | 332.02 | wind | 5.0 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 306 | 332.19 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 9 | 5 |
| 359 | 332.67 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 362 | 332.70 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 372 | 332.70 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 412 | 332.98 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 17 |
| 424 | 333.10 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 439 | 333.21 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 8 | 8 |
| 446 | 333.36 | temperature | 20.0 | 90 | > th | dose independent | rect. | 22 | 22 |
| 476 | 333.70 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 7 |
| 477 | 333.72 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 1 |
| 478 | 333.72 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 1 |
| 480 | 333.77 | humidity | 80.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 494 | 334.04 | wind | 3.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 496 | 334.06 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 497 | 334.08 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 22 | 9 |
| 511 | 334.16 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 521 | 334.22 | humidity | 80.0 | 90 | > th | dose independent | rect. | 12 | 1 |
| 524 | 334.24 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 525 | 334.26 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 545 | 334.39 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 550 | 334.42 | humidity | 80.0 | 720 | > th | dose independent | rect. | 12 | 1 |
| 562 | 334.53 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 3 | 3 |
| 580 | 334.63 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 623 | 334.84 | temperature | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 645 | 334.95 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 661 | 335.14 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 2 | 3 |
| 674 | 335.19 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 677 | 335.19 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 680 | 335.21 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 716 | 335.36 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 9 |
| 718 | 335.39 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 11 | 12 |
| 723 | 335.40 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 11 | 15 |
| 774 | 335.51 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 23 | 8 |
| 779 | 335.52 | wind | 3.0 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 811 | 335.64 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 816 | 335.66 | humidity | 70.0 | 10 | < th | dose independent | rect. | 17 | 1 |
| 821 | 335.68 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 836 | 335.74 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 838 | 335.74 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 848 | 335.77 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 867 | 335.85 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 5 |
| 881 | 335.92 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 21 | NA |
| 885 | 335.94 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 897 | 335.98 | radiation | 40.0 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 900 | 335.99 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 901 | 335.99 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 903 | 335.99 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 7 |
| 930 | 336.13 | wind | 3.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 960 | 336.20 | temperature | 15.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 977 | 336.23 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 984 | 336.25 | temperature | 15.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 994 | 336.26 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 11 | 12 |
| 996 | 336.26 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 11 | 15 |