Os02g0581200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0581200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 257.64 | 0.754 | 3.04 | -0.628 | 0.358 | 3.22 | -0.436 | -6.61 | -0.153 | 17.4 | 50 | 214 | -- | -- |
| 263.46 | 0.756 | 3.01 | -0.433 | 0.361 | 1.94 | -0.786 | -- | -0.167 | 17.5 | 49 | 215 | -- | -- |
| 258.07 | 0.748 | 3.04 | -0.622 | 0.364 | 3.18 | -- | -6.76 | -0.155 | 17.6 | 49.81 | 214 | -- | -- |
| 263.81 | 0.756 | 3.01 | -0.455 | 0.4 | 1.91 | -- | -- | -0.159 | 17.9 | 49 | 217 | -- | -- |
| 264.16 | 0.757 | 3.03 | -0.664 | -- | 3.59 | -- | -7.08 | -0.15 | -- | 50 | 214 | -- | -- |
| 282.33 | 0.788 | 3.02 | -0.334 | 0.609 | -- | 0.184 | -- | -0.215 | 17.9 | -- | -- | -- | -- |
| 282.41 | 0.787 | 3.02 | -0.335 | 0.61 | -- | -- | -- | -0.215 | 17.9 | -- | -- | -- | -- |
| 271.04 | 0.767 | 3 | -0.519 | -- | 2.25 | -- | -- | -0.165 | -- | 49.13 | 214 | -- | -- |
| 269.59 | 0.765 | 3 | -- | 0.426 | 1.69 | -- | -- | -0.119 | 17.9 | 49.96 | 214 | -- | -- |
| 301.7 | 0.812 | 3.01 | -0.353 | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
| 285.37 | 0.79 | 3.02 | -- | 0.615 | -- | -- | -- | -0.177 | 17.9 | -- | -- | -- | -- |
| 277.99 | 0.777 | 2.99 | -- | -- | 2.09 | -- | -- | -0.113 | -- | 49.01 | 214 | -- | -- |
| 305 | 0.815 | 3.01 | -- | -- | -- | -- | -- | -0.19 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 245.78 | humidity | 80 | 270 | < th | dose dependent | rect. | 14 | 4 |
| 4 | 246.85 | humidity | 80 | 270 | < th | dose dependent | rect. | 15 | 1 |
| 5 | 246.91 | humidity | 90 | 10 | < th | dose dependent | rect. | 15 | 5 |
| 6 | 246.99 | humidity | 50 | 270 | > th | dose independent | rect. | 3 | 23 |
| 18 | 247.89 | humidity | 80 | 90 | < th | dose dependent | sin | 14 | NA |
| 21 | 247.96 | humidity | 80 | 90 | < th | dose dependent | rect. | 15 | 15 |
| 26 | 248.13 | humidity | 80 | 90 | < th | dose dependent | rect. | 15 | 11 |
| 31 | 248.50 | humidity | 50 | 270 | > th | dose independent | rect. | 16 | 23 |
| 42 | 248.92 | humidity | 80 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 65 | 249.50 | humidity | 60 | 10 | > th | dose dependent | rect. | 12 | 14 |
| 78 | 250.08 | humidity | 90 | 10 | < th | dose dependent | rect. | 15 | 12 |
| 80 | 250.10 | humidity | 70 | 270 | < th | dose independent | rect. | 15 | 3 |
| 82 | 250.15 | humidity | 80 | 10 | < th | dose dependent | sin | 13 | NA |
| 87 | 250.30 | humidity | 90 | 10 | < th | dose dependent | rect. | 15 | 15 |
| 126 | 250.98 | humidity | 70 | 270 | > th | dose independent | rect. | 15 | 9 |
| 135 | 251.11 | temperature | 30 | 270 | < th | dose independent | rect. | 16 | 9 |
| 165 | 251.63 | humidity | 80 | 10 | < th | dose independent | rect. | 15 | 5 |
| 180 | 251.77 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 4 |
| 195 | 251.91 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 1 |
| 208 | 252.04 | humidity | 80 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 250 | 252.52 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 15 |
| 253 | 252.56 | humidity | 60 | 10 | > th | dose dependent | rect. | 18 | 8 |
| 257 | 252.63 | humidity | 70 | 90 | > th | dose independent | rect. | 18 | 8 |
| 258 | 252.63 | humidity | 60 | 10 | > th | dose dependent | sin | 15 | NA |
| 263 | 252.66 | radiation | 1 | 270 | > th | dose independent | sin | 17 | NA |
| 269 | 252.76 | radiation | 1 | 270 | < th | dose independent | rect. | 6 | 18 |
| 271 | 252.78 | radiation | 1 | 270 | < th | dose independent | sin | 18 | NA |
| 277 | 252.85 | humidity | 50 | 270 | > th | dose dependent | rect. | 15 | 9 |
| 279 | 252.88 | humidity | 50 | 90 | > th | dose dependent | sin | 16 | NA |
| 311 | 253.10 | humidity | 50 | 270 | > th | dose independent | rect. | 6 | 17 |
| 342 | 253.32 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 19 |
| 358 | 253.44 | temperature | 30 | 270 | < th | dose independent | rect. | 4 | 21 |
| 369 | 253.58 | humidity | 70 | 10 | > th | dose independent | rect. | 18 | 8 |
| 370 | 253.58 | radiation | 1 | 270 | < th | dose dependent | sin | 18 | NA |
| 378 | 253.65 | radiation | 1 | 270 | < th | dose dependent | rect. | 6 | 18 |
| 408 | 253.95 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 5 |
| 423 | 254.04 | humidity | 50 | 270 | > th | dose independent | rect. | 9 | 14 |
| 428 | 254.08 | radiation | 1 | 270 | > th | dose independent | rect. | 13 | 6 |
| 451 | 254.13 | humidity | 50 | 270 | > th | dose dependent | rect. | 6 | 18 |
| 474 | 254.20 | humidity | 50 | 270 | > th | dose dependent | rect. | 9 | 14 |
| 512 | 254.42 | humidity | 80 | 10 | > th | dose independent | rect. | 12 | 14 |
| 525 | 254.43 | radiation | 1 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 698 | 255.02 | radiation | 1 | 270 | > th | dose independent | rect. | 15 | 1 |
| 738 | 255.21 | humidity | 70 | 10 | > th | dose dependent | rect. | 10 | 16 |
| 747 | 255.26 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 16 |
| 758 | 255.32 | radiation | 10 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 767 | 255.35 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 14 |
| 774 | 255.39 | radiation | 1 | 270 | < th | dose independent | rect. | 4 | 22 |
| 875 | 255.79 | temperature | 25 | 270 | > th | dose independent | rect. | 14 | 2 |
| 878 | 255.79 | humidity | 80 | 10 | < th | dose independent | rect. | 15 | 16 |
| 916 | 255.95 | humidity | 80 | 10 | < th | dose independent | rect. | 15 | 12 |