Os02g0581000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Phosphatidylinositol glycan class N (Fragment).
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Os02g0581000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Phosphatidylinositol glycan class N (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.17 | 0.352 | 9.34 | 1.12 | 0.929 | -1.43 | -0.0946 | 1.21 | 0.39 | 8.5 | 16.01 | 6 | -- | -- |
| 57.39 | 0.353 | 9.35 | 0.957 | 0.929 | -1.43 | 0.0399 | -- | 0.338 | 8.46 | 15.33 | 4 | -- | -- |
| 56.19 | 0.349 | 9.34 | 1.11 | 0.931 | -1.43 | -- | 1.17 | 0.387 | 8.49 | 16 | 4 | -- | -- |
| 57.38 | 0.353 | 9.36 | 0.943 | 0.925 | -1.45 | -- | -- | 0.341 | 8.5 | 15.3 | 4 | -- | -- |
| 82.11 | 0.422 | 9.35 | 1.17 | -- | -1.56 | -- | 0.877 | 0.446 | -- | 18 | 487 | -- | -- |
| 79.23 | 0.417 | 9.41 | 0.65 | 0.999 | -- | 0.0944 | -- | 0.129 | 6.81 | -- | -- | -- | -- |
| 79.25 | 0.417 | 9.41 | 0.652 | 0.999 | -- | -- | -- | 0.129 | 6.81 | -- | -- | -- | -- |
| 83.33 | 0.425 | 9.37 | 1.06 | -- | -1.7 | -- | -- | 0.403 | -- | 15.49 | 487 | -- | -- |
| 78.72 | 0.415 | 9.39 | -- | 0.933 | -1.02 | -- | -- | 0.181 | 7.9 | 15.3 | 4 | -- | -- |
| 131.48 | 0.536 | 9.43 | 0.674 | -- | -- | -- | -- | 0.148 | -- | -- | -- | -- | -- |
| 90.44 | 0.445 | 9.42 | -- | 1.01 | -- | -- | -- | 0.0562 | 6.77 | -- | -- | -- | -- |
| 109.23 | 0.487 | 9.41 | -- | -- | -1.12 | -- | -- | 0.235 | -- | 20.46 | 488 | -- | -- |
| 143.45 | 0.559 | 9.44 | -- | -- | -- | -- | -- | 0.0733 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.05 | temperature | 15 | 30 | > th | dose dependent | sin | 6 | NA |
| 17 | 47.02 | temperature | 30 | 30 | < th | dose dependent | sin | 5 | NA |
| 37 | 48.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 21 |
| 42 | 49.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 49 | 50.00 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 20 |
| 55 | 50.30 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 60 | 50.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 61 | 50.49 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 7 |
| 66 | 50.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 79 | 51.04 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 13 |
| 81 | 51.06 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 16 |
| 90 | 51.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 13 |
| 107 | 51.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 108 | 51.92 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 15 |
| 149 | 52.68 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 183 | 53.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 249 | 53.92 | temperature | 20 | 270 | > th | dose dependent | rect. | 6 | 3 |
| 270 | 54.11 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 7 |
| 273 | 54.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 22 |
| 285 | 54.25 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 374 | 54.92 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 483 | 55.82 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 487 | 55.88 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 15 |
| 535 | 56.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 590 | 56.41 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 591 | 56.42 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 615 | 56.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 638 | 56.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 644 | 56.71 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 667 | 56.84 | temperature | 25 | 90 | < th | dose independent | sin | 6 | NA |
| 672 | 56.86 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 21 |
| 729 | 57.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 739 | 57.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 747 | 57.21 | temperature | 25 | 90 | > th | dose independent | sin | 6 | NA |
| 770 | 57.29 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 813 | 57.49 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 3 |
| 821 | 57.51 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 858 | 57.70 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 18 |
| 927 | 57.97 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 941 | 58.03 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 986 | 58.28 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |