Os02g0580700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0580700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.88 | 0.308 | 8.93 | 0.0261 | 0.327 | 1.29 | -0.3 | 1.35 | -0.0416 | 9.71 | 18.07 | 10 | -- | -- |
| 44.47 | 0.313 | 8.95 | -0.189 | 0.319 | 1.29 | 0.0202 | -- | -0.097 | 10.1 | 18.54 | 18 | -- | -- |
| 43.15 | 0.306 | 8.93 | -0.00593 | 0.328 | 1.27 | -- | 1.14 | -0.0419 | 9.98 | 18.1 | 10 | -- | -- |
| 44.42 | 0.31 | 8.95 | -0.199 | 0.329 | 1.28 | -- | -- | -0.0911 | 9.89 | 18.7 | 10 | -- | -- |
| 48.9 | 0.326 | 8.95 | -0.0313 | -- | 1.44 | -- | 1.13 | -0.0732 | -- | 18.1 | 4 | -- | -- |
| 66.58 | 0.383 | 8.91 | 0.0687 | 0.66 | -- | 0.491 | -- | 0.116 | 12.8 | -- | -- | -- | -- |
| 67.56 | 0.385 | 8.9 | 0.0863 | 0.659 | -- | -- | -- | 0.118 | 12.6 | -- | -- | -- | -- |
| 50 | 0.329 | 8.97 | -0.227 | -- | 1.45 | -- | -- | -0.124 | -- | 18.6 | 4 | -- | -- |
| 45.26 | 0.313 | 8.95 | -- | 0.337 | 1.21 | -- | -- | -0.0723 | 10.1 | 19.48 | 10 | -- | -- |
| 94.77 | 0.455 | 8.92 | 0.0631 | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
| 67.76 | 0.385 | 8.91 | -- | 0.657 | -- | -- | -- | 0.109 | 12.6 | -- | -- | -- | -- |
| 51.29 | 0.334 | 8.96 | -- | -- | 1.38 | -- | -- | -0.091 | -- | 18.78 | 4 | -- | -- |
| 94.87 | 0.455 | 8.92 | -- | -- | -- | -- | -- | 0.1 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.59 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 7 | 39.79 | temperature | 20 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 47 | 41.73 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 21 |
| 54 | 42.05 | temperature | 20 | 90 | > th | dose dependent | sin | 4 | NA |
| 61 | 42.26 | temperature | 10 | 90 | > th | dose dependent | sin | 4 | NA |
| 107 | 42.96 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 114 | 43.09 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 116 | 43.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 156 | 43.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 184 | 43.93 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 204 | 44.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 221 | 44.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 226 | 44.38 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 249 | 44.56 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 255 | 44.61 | temperature | 25 | 270 | > th | dose dependent | sin | 8 | NA |
| 268 | 44.69 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 274 | 44.74 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 288 | 44.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 289 | 44.90 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 305 | 45.01 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 321 | 45.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 17 |
| 327 | 45.23 | temperature | 25 | 270 | < th | dose independent | rect. | 23 | 22 |
| 332 | 45.25 | temperature | 30 | 90 | < th | dose dependent | sin | 4 | NA |
| 366 | 45.47 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 372 | 45.49 | temperature | 20 | 90 | > th | dose dependent | rect. | 21 | 19 |
| 386 | 45.54 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 389 | 45.55 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 456 | 45.87 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 491 | 46.06 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 508 | 46.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 9 |
| 558 | 46.42 | temperature | 25 | 270 | > th | dose independent | rect. | 17 | 23 |
| 596 | 46.60 | temperature | 25 | 270 | > th | dose independent | rect. | 15 | 23 |
| 663 | 46.88 | temperature | 20 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 691 | 47.00 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 737 | 47.16 | temperature | 25 | 270 | > th | dose independent | rect. | 24 | 23 |
| 786 | 47.29 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 23 |
| 803 | 47.33 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 21 |
| 812 | 47.37 | temperature | 25 | 270 | > th | dose independent | rect. | 4 | 23 |
| 855 | 47.54 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 23 |
| 866 | 47.58 | temperature | 25 | 270 | > th | dose independent | no | NA | NA |
| 868 | 47.59 | temperature | 25 | 270 | < th | dose independent | no | NA | NA |
| 888 | 47.64 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 23 |
| 907 | 47.68 | temperature | 25 | 270 | < th | dose independent | rect. | 16 | 23 |
| 932 | 47.73 | temperature | 25 | 270 | < th | dose independent | sin | 6 | NA |