Os02g0579000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : No apical meristem (NAM) protein domain containing protein.
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Os02g0579000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : No apical meristem (NAM) protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 270.85 | 0.773 | 7.76 | -0.826 | 2.93 | 5.05 | -0.119 | 12.7 | -0.127 | 14.8 | 1.12 | 4350 | 6.12 | -- |
| 396.45 | 0.927 | 7.62 | 2.38 | 2.97 | 4.73 | -0.329 | -- | 0.403 | 15.1 | 2.09 | 4341 | 3.59 | -- |
| 270.34 | 0.766 | 7.76 | -0.819 | 2.96 | 5.08 | -- | 12.8 | -0.136 | 14.8 | 1.08 | 4351 | 6.31 | -- |
| 390.23 | 0.92 | 7.53 | 1.39 | 2.5 | 3.53 | -- | -- | 0.464 | 15.3 | 3.05 | 4319 | 6.34 | -- |
| 641.15 | 1.18 | 7.76 | -1.19 | -- | 5.13 | -- | 13 | -0.201 | -- | 1.359 | 4297 | 7.56 | -- |
| 767.36 | 1.3 | 7.74 | 1.43 | 2.76 | -- | -0.632 | -- | -0.386 | 15.2 | -- | -- | -- | -- |
| 768.62 | 1.3 | 7.74 | 1.42 | 2.76 | -- | -- | -- | -0.39 | 15.3 | -- | -- | -- | -- |
| 592.17 | 1.13 | 7.31 | 1.72 | -- | 4.43 | -- | -- | 1.15 | -- | 3.521 | 15752 | 5.26 | -- |
| 461.34 | 1 | 7.53 | -- | 2.5 | 3.72 | -- | -- | 0.464 | 15.3 | 3.05 | 4319 | 6.34 | -- |
| 1199.41 | 1.62 | 7.74 | 1.3 | -- | -- | -- | -- | -0.462 | -- | -- | -- | -- | -- |
| 821.55 | 1.34 | 7.77 | -- | 2.73 | -- | -- | -- | -0.547 | 15.3 | -- | -- | -- | -- |
| 669.82 | 1.21 | 7.49 | -- | -- | 4.16 | -- | -- | 0.691 | -- | 4.596 | 15763 | 6.56 | -- |
| 1243.99 | 1.65 | 7.78 | -- | -- | -- | -- | -- | -0.606 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 231.95 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 4 | 234.99 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 19 |
| 8 | 235.51 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 11 | 237.23 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 20 | 238.67 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 19 |
| 22 | 238.79 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 21 |
| 27 | 239.21 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 28 | 239.28 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 30 | 239.55 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 31 | 239.59 | radiation | 1 | 14400 | > th | dose independent | sin | 10 | NA |
| 50 | 240.98 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 57 | 241.13 | radiation | 1 | 14400 | < th | dose independent | sin | 10 | NA |
| 85 | 242.50 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 88 | 242.92 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 98 | 242.97 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 17 |
| 142 | 243.33 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 146 | 243.36 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 192 | 243.85 | radiation | 1 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 199 | 243.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 207 | 244.04 | radiation | 1 | 14400 | > th | dose independent | no | NA | NA |
| 208 | 244.04 | radiation | 1 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 346 | 244.96 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 366 | 245.09 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 9 |
| 367 | 245.09 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 392 | 245.29 | humidity | 90 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 395 | 245.34 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 405 | 245.56 | radiation | 1 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 407 | 245.57 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 414 | 245.91 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 437 | 246.29 | radiation | 1 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 438 | 246.32 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 443 | 246.40 | radiation | 1 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 447 | 246.44 | radiation | 1 | 14400 | < th | dose independent | rect. | 22 | 21 |
| 455 | 246.48 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 457 | 246.49 | radiation | 1 | 14400 | < th | dose independent | no | NA | NA |
| 469 | 246.51 | radiation | 1 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 492 | 246.63 | radiation | 1 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 533 | 247.19 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 541 | 247.43 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 565 | 247.92 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 568 | 247.98 | humidity | 90 | 43200 | > th | dose dependent | rect. | 7 | 17 |
| 571 | 248.05 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 19 |
| 573 | 248.09 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 15 |
| 612 | 248.78 | radiation | 1 | 14400 | < th | dose dependent | sin | 13 | NA |
| 664 | 249.75 | humidity | 90 | 43200 | > th | dose independent | rect. | 7 | 17 |
| 686 | 250.06 | humidity | 90 | 43200 | > th | dose dependent | sin | 19 | NA |
| 697 | 250.20 | humidity | 90 | 43200 | > th | dose independent | rect. | 16 | 7 |
| 776 | 251.41 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 20 |
| 777 | 251.41 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 22 |
| 789 | 251.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 14 |
| 795 | 251.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 21 |
| 819 | 251.86 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 825 | 251.95 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 23 |
| 837 | 252.07 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 854 | 252.30 | humidity | 90 | 43200 | > th | dose independent | rect. | 7 | 4 |
| 863 | 252.53 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 12 |
| 877 | 252.57 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 22 |
| 884 | 252.62 | radiation | 1 | 14400 | < th | dose dependent | no | NA | NA |
| 886 | 252.62 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 23 |
| 895 | 252.65 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 896 | 252.65 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 23 |
| 921 | 252.80 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 17 |
| 963 | 253.25 | temperature | 25 | 43200 | < th | dose dependent | rect. | 17 | 1 |