Os02g0578300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Glucosyltransferase (Fragment).
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Os02g0578300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Glucosyltransferase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.79 | 0.554 | 7.93 | 2.33 | 0.493 | -1.88 | 2.1 | -0.159 | 0.403 | 20.3 | 19.93 | 353 | -- | -- |
| 138.79 | 0.549 | 7.92 | 2.35 | 0.505 | -1.88 | 2.08 | -- | 0.411 | 20.4 | 20.04 | 365 | -- | -- |
| 151.62 | 0.573 | 7.91 | 2.44 | 0.509 | -1.9 | -- | 0.802 | 0.446 | 20.1 | 20.08 | 353 | -- | -- |
| 152.21 | 0.575 | 7.92 | 2.28 | 0.471 | -1.84 | -- | -- | 0.403 | 20.1 | 20.1 | 338 | -- | -- |
| 159.14 | 0.588 | 7.92 | 2.2 | -- | -1.71 | -- | -0.0586 | 0.373 | -- | 19.13 | 198 | -- | -- |
| 206.92 | 0.674 | 7.98 | 1.9 | 0.429 | -- | 1.21 | -- | 0.0903 | 0.983 | -- | -- | -- | -- |
| 211.17 | 0.681 | 7.98 | 1.86 | 0.474 | -- | -- | -- | 0.0803 | 2.54 | -- | -- | -- | -- |
| 159.04 | 0.587 | 7.92 | 2.23 | -- | -1.67 | -- | -- | 0.357 | -- | 19.5 | 178 | -- | -- |
| 277.86 | 0.776 | 8 | -- | 0.352 | -1.09 | -- | -- | 0.023 | 22.6 | 21.97 | 334 | -- | -- |
| 224.38 | 0.7 | 7.98 | 1.88 | -- | -- | -- | -- | 0.0921 | -- | -- | -- | -- | -- |
| 301.87 | 0.813 | 8.03 | -- | 0.51 | -- | -- | -- | -0.126 | 2.59 | -- | -- | -- | -- |
| 279.08 | 0.778 | 8.02 | -- | -- | -1.25 | -- | -- | -0.086 | -- | 25.7 | 111 | -- | -- |
| 317.14 | 0.831 | 8.03 | -- | -- | -- | -- | -- | -0.116 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 138.74 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 2 | 139.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 3 | 139.25 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 4 | 139.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 9 | 140.15 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 12 | 140.26 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 13 | 140.28 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 14 | 140.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 19 |
| 26 | 140.92 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 93 | 142.95 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 101 | 143.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 121 | 143.61 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 21 |
| 153 | 144.20 | temperature | 25 | 720 | > th | dose dependent | sin | 8 | NA |
| 179 | 144.60 | temperature | 20 | 720 | > th | dose dependent | sin | 2 | NA |
| 466 | 147.43 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 15 |
| 554 | 147.65 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 20 |
| 570 | 147.68 | temperature | 25 | 1440 | > th | dose dependent | rect. | 10 | 7 |
| 577 | 147.69 | temperature | 25 | 4320 | > th | dose independent | rect. | 24 | 16 |
| 579 | 147.69 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 624 | 147.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 638 | 147.77 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 661 | 147.79 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 23 |
| 698 | 147.84 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 23 |
| 720 | 147.88 | radiation | 1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 755 | 147.94 | temperature | 25 | 4320 | < th | dose independent | sin | 4 | NA |
| 930 | 148.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 14 | 5 |