Os02g0576400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0576400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 191.45 | 0.65 | 2.91 | 0.251 | 0.542 | -0.966 | -0.31 | 3.88 | 0.193 | 14.7 | 25.2 | 96 | -- | -- |
| 194.19 | 0.649 | 2.95 | -0.117 | 0.335 | -0.724 | -0.108 | -- | 0.135 | 15.1 | 14.64 | 518 | -- | -- |
| 191.72 | 0.645 | 2.91 | 0.202 | 0.541 | -0.949 | -- | 3.51 | 0.182 | 14.6 | 25.2 | 95 | -- | -- |
| 193.59 | 0.648 | 2.95 | -0.112 | 0.388 | -0.887 | -- | -- | 0.159 | 15.9 | 14.15 | 489 | -- | -- |
| 202.6 | 0.663 | 2.94 | -0.000908 | -- | -0.426 | -- | 2.97 | 0.0969 | -- | 25.7 | 46 | -- | -- |
| 202.52 | 0.667 | 2.97 | -0.318 | 0.254 | -- | 0.11 | -- | 0.0256 | 13.3 | -- | -- | -- | -- |
| 202.56 | 0.666 | 2.97 | -0.314 | 0.255 | -- | -- | -- | 0.0264 | 13.4 | -- | -- | -- | -- |
| 195.85 | 0.652 | 2.94 | -0.0896 | -- | -0.804 | -- | -- | 0.158 | -- | -80.88 | 1046 | -- | -- |
| 193.88 | 0.649 | 2.94 | -- | 0.4 | -0.939 | -- | -- | 0.177 | 16 | 13.33 | 492 | -- | -- |
| 206.56 | 0.672 | 2.98 | -0.324 | -- | -- | -- | -- | 0.0209 | -- | -- | -- | -- | -- |
| 205.15 | 0.67 | 2.96 | -- | 0.261 | -- | -- | -- | 0.0613 | 13.5 | -- | -- | -- | -- |
| 196.03 | 0.652 | 2.94 | -- | -- | -0.841 | -- | -- | 0.173 | -- | 11.99 | 1048 | -- | -- |
| 209.32 | 0.675 | 2.97 | -- | -- | -- | -- | -- | 0.0568 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.42 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 3 | 181.80 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 4 |
| 8 | 182.68 | wind | 7.0 | 10 | < th | dose independent | rect. | 12 | 23 |
| 23 | 184.38 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 2 |
| 37 | 185.06 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 4 |
| 52 | 185.96 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 54 | 186.04 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 58 | 186.25 | temperature | 15.0 | 10 | > th | dose independent | rect. | 12 | 23 |
| 67 | 186.56 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 85 | 186.97 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 86 | 186.97 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 87 | 187.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 18 |
| 88 | 187.05 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 89 | 187.05 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 104 | 187.44 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 10 |
| 117 | 187.70 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 121 | 187.83 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 125 | 187.93 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 19 |
| 128 | 187.96 | humidity | 60.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 136 | 188.10 | wind | 9.0 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 138 | 188.13 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 21 |
| 140 | 188.15 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 141 | 188.15 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 142 | 188.17 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 143 | 188.17 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 148 | 188.24 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 17 |
| 157 | 188.36 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 10 | 3 |
| 165 | 188.39 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 15 |
| 172 | 188.47 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 175 | 188.51 | temperature | 15.0 | 10 | > th | dose independent | rect. | 14 | 21 |
| 190 | 188.59 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 4 | 6 |
| 191 | 188.60 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 216 | 188.76 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 22 | 17 |
| 218 | 188.77 | wind | 9.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 233 | 188.83 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 234 | 188.83 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 243 | 188.85 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 14 |
| 248 | 188.87 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 250 | 188.87 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 251 | 188.87 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 252 | 188.87 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 11 | 1 |
| 253 | 188.87 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 255 | 188.87 | humidity | 50.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 256 | 188.87 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 257 | 188.87 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 266 | 188.92 | wind | 1.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 285 | 188.98 | radiation | 1.0 | 30 | > th | dose independent | rect. | 11 | 1 |
| 290 | 189.01 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 1 |
| 299 | 189.04 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 24 | 18 |
| 304 | 189.06 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 11 |
| 325 | 189.13 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 340 | 189.18 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 7 |
| 347 | 189.22 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 23 |
| 350 | 189.22 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 23 |
| 355 | 189.24 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 5 |
| 367 | 189.28 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 12 | 23 |
| 376 | 189.30 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 377 | 189.30 | temperature | 30.0 | 720 | < th | dose dependent | sin | 4 | NA |
| 381 | 189.31 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 387 | 189.33 | wind | 7.0 | 30 | < th | dose independent | rect. | 12 | 10 |
| 392 | 189.34 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 394 | 189.34 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 395 | 189.34 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 3 |
| 407 | 189.37 | humidity | 60.0 | 30 | > th | dose independent | rect. | 3 | 8 |
| 408 | 189.37 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 411 | 189.37 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 10 | 15 |
| 426 | 189.42 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 465 | 189.51 | temperature | 10.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 469 | 189.52 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 481 | 189.54 | atmosphere | 1000.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 485 | 189.54 | radiation | 20.0 | 270 | < th | dose independent | rect. | 9 | 2 |
| 508 | 189.57 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 588 | 189.66 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 4 | 15 |
| 594 | 189.67 | atmosphere | 1000.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 609 | 189.68 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 14 | 21 |
| 639 | 189.71 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 16 |
| 679 | 189.76 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 23 |
| 699 | 189.79 | wind | 9.0 | 10 | < th | dose dependent | rect. | 12 | 23 |
| 765 | 189.88 | humidity | 90.0 | 30 | < th | dose independent | rect. | 11 | 1 |
| 844 | 189.95 | radiation | 1.0 | 30 | > th | dose independent | rect. | 14 | 21 |
| 876 | 189.98 | wind | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 929 | 190.03 | wind | 9.0 | 270 | < th | dose dependent | rect. | 12 | 9 |
| 970 | 190.06 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 11 | 18 |