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Os02g0574500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0284) R2 : 0.83
β1 : 1.81 (0.104) R2dD : 0.111 R2D : 0.0732
β2 : 1.15 (0.0688) R2dC : 0.111 R2C : 0.0211
β3 : -3.38 (0.0778) R2dE : 0.727 R2E : 0.599
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.384 (0.0606) R2dN8 : 0.0202 R2N8 : -0.0076
σ : 0.53
deviance : 129.67
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C
peak time of C : 1.25
E
wheather : temperature
threshold : 2.473
memory length : 240
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 10.9
open length of G : 14.5

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
131.71 0.539 10.2 1.76 1.02 -3.14 -0.00936 -0.573 0.382 2.51 5.44 251 10.5 14.9
130.94 0.533 10.3 1.81 1.12 -3.14 0.14 -- 0.383 2.19 3.498 241 10.7 14.8
130.19 0.531 10.3 1.77 1.11 -3.25 -- -0.38 0.366 1.88 3.272 240 10.7 14.8
129.67 0.53 10.3 1.81 1.15 -3.38 -- -- 0.384 1.25 2.473 240 10.9 14.5
145.82 0.562 10.3 1.86 -- -3.54 -- -0.619 0.336 -- 6.458 322 9.03 14.4
188.31 0.643 10.2 1.48 3.12 -- 0.99 -- 0.211 6.22 -- -- -- --
190.72 0.647 10.2 1.49 3.13 -- -- -- 0.208 6.2 -- -- -- --
145.64 0.562 10.2 1.86 -- -3.59 -- -- 0.364 -- 6.478 323 8.86 14.6
207.69 0.671 10.3 -- 1.29 -3.15 -- -- 0.177 1.64 -2.002 221 11.1 14.5
697.91 1.23 10.3 1.58 -- -- -- -- 0.276 -- -- -- -- --
249.6 0.739 10.2 -- 3.15 -- -- -- 0.0411 6.18 -- -- -- --
237.09 0.717 10.3 -- -- -3.46 -- -- 0.235 -- 5.816 309 9.05 14.5
763.83 1.29 10.3 -- -- -- -- -- 0.101 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 136.91 temperature 10.0 270 > th dose dependent rect. 10 15
9 142.93 radiation 40.0 270 < th dose dependent rect. 10 11
14 144.03 radiation 30.0 270 < th dose independent rect. 2 19
16 144.22 radiation 30.0 270 < th dose independent rect. 1 21
17 144.33 radiation 40.0 270 < th dose dependent rect. 3 17
20 144.52 radiation 20.0 270 < th dose dependent rect. 14 6
21 144.56 radiation 30.0 270 < th dose independent rect. 3 17
22 144.56 radiation 40.0 270 < th dose dependent rect. 14 7
35 145.10 radiation 40.0 270 < th dose dependent rect. 1 21
52 145.68 temperature 10.0 270 > th dose dependent rect. 20 20
64 146.18 temperature 30.0 270 < th dose dependent rect. 17 3
65 146.23 radiation 1.0 270 < th dose dependent rect. 16 3
69 146.31 temperature 10.0 90 > th dose dependent rect. 13 14
70 146.32 radiation 1.0 270 < th dose independent rect. 16 3
77 146.57 temperature 30.0 270 < th dose dependent rect. 15 6
78 146.62 radiation 20.0 270 < th dose independent rect. 14 7
93 146.97 radiation 40.0 270 < th dose dependent rect. 14 21
99 147.15 temperature 30.0 90 < th dose dependent rect. 17 6
129 147.95 radiation 30.0 270 < th dose independent rect. 10 11
141 148.17 temperature 10.0 90 > th dose dependent rect. 22 19
159 148.81 radiation 10.0 270 < th dose independent rect. 11 9
181 149.22 temperature 25.0 90 < th dose independent rect. 17 6
197 149.68 radiation 30.0 270 < th dose dependent rect. 15 18
213 149.87 radiation 20.0 270 < th dose independent rect. 15 18
214 149.89 temperature 10.0 270 > th dose dependent rect. 20 7
218 149.95 temperature 30.0 10 < th dose dependent rect. 17 5
236 150.11 atmosphere 1000.0 270 > th dose independent rect. 17 3
248 150.35 radiation 30.0 270 < th dose independent rect. 14 21
250 150.36 temperature 15.0 270 > th dose dependent rect. 21 5
272 150.74 wind 9.0 270 < th dose dependent rect. 15 6
309 151.30 atmosphere 995.0 270 > th dose dependent rect. 17 3
312 151.32 atmosphere 1000.0 270 > th dose independent rect. 16 5
319 151.49 temperature 15.0 10 > th dose dependent rect. 13 15
320 151.50 temperature 30.0 270 < th dose independent rect. 2 9
321 151.50 radiation 40.0 270 < th dose dependent sin 23 NA
334 151.64 wind 9.0 270 < th dose independent rect. 20 21
346 151.75 radiation 40.0 270 < th dose independent rect. 2 9
348 151.77 humidity 50.0 270 > th dose dependent rect. 17 3
357 151.91 radiation 1.0 270 > th dose dependent sin 22 NA
369 151.98 temperature 15.0 270 > th dose independent rect. 21 19
384 152.06 temperature 15.0 270 > th dose independent rect. 20 21
410 152.29 temperature 25.0 270 < th dose independent rect. 17 3
421 152.40 wind 9.0 270 < th dose independent rect. 21 19
432 152.47 radiation 1.0 270 > th dose dependent rect. 9 8
440 152.52 radiation 40.0 270 < th dose dependent rect. 10 23
442 152.54 humidity 50.0 270 > th dose independent rect. 21 19
465 152.79 radiation 10.0 90 < th dose dependent sin 20 NA
470 152.86 atmosphere 1015.0 270 < th dose independent rect. 21 19
476 152.88 radiation 1.0 10 < th dose dependent rect. 16 6
487 152.95 precipitation 0.1 270 < th dose independent rect. 11 14
488 152.95 precipitation 0.1 270 < th dose dependent rect. 11 14
490 152.96 wind 9.0 270 < th dose dependent rect. 16 4
492 152.98 precipitation 0.1 270 < th dose independent rect. 20 21
494 152.98 radiation 1.0 270 > th dose dependent rect. 9 21
495 152.98 precipitation 0.1 270 < th dose dependent rect. 20 21
515 153.05 radiation 1.0 270 > th dose dependent rect. 9 23
518 153.08 temperature 10.0 270 > th dose independent rect. 17 3
519 153.08 atmosphere 1015.0 270 < th dose independent rect. 17 3
530 153.11 humidity 50.0 270 > th dose independent rect. 17 3
537 153.20 humidity 50.0 10 > th dose dependent rect. 17 5
542 153.23 radiation 1.0 30 < th dose independent rect. 15 7
553 153.31 atmosphere 1000.0 30 > th dose independent rect. 4 18
580 153.48 temperature 25.0 270 > th dose independent rect. 11 15
581 153.49 temperature 10.0 270 > th dose independent rect. 16 5
602 153.53 wind 9.0 270 < th dose independent rect. 11 14
613 153.60 atmosphere 1015.0 90 < th dose dependent rect. 22 19
614 153.62 wind 9.0 270 < th dose independent rect. 17 3
643 153.80 wind 1.0 270 > th dose independent rect. 17 3
679 154.01 precipitation 0.1 270 < th dose independent rect. 21 19
681 154.01 precipitation 0.1 270 < th dose dependent rect. 21 19
684 154.03 atmosphere 1000.0 30 > th dose independent rect. 6 16
698 154.05 temperature 15.0 30 > th dose dependent rect. 22 6
726 154.21 radiation 1.0 270 > th dose dependent rect. 4 13
738 154.23 precipitation 0.1 270 < th dose independent rect. 1 10
741 154.23 precipitation 0.1 270 < th dose dependent rect. 1 10
773 154.31 wind 9.0 270 < th dose independent rect. 16 5
789 154.37 radiation 30.0 270 < th dose independent rect. 10 23
802 154.41 wind 1.0 270 > th dose independent rect. 11 15
837 154.61 precipitation 0.1 270 < th dose independent rect. 17 3
839 154.61 precipitation 0.1 270 < th dose dependent rect. 17 3
840 154.61 temperature 10.0 270 > th dose dependent rect. 8 8
865 154.73 wind 1.0 270 > th dose independent rect. 16 5
900 154.81 radiation 1.0 270 > th dose dependent no NA NA