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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0574000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Monosaccharide transporter 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.03 (0.0147) R2 : 0.00569
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.05 (0.0309) R2dN8 : 0.00735 R2N8 : 0.00569
σ : 0.277
deviance : 35.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.1 0.274 3.03 0.0869 0.0723 -0.0988 -0.0701 -0.544 0.0466 6.61 70.12 5877 -- --
34.4 0.273 3.04 0.065 0.0798 -0.154 -0.0815 -- -0.00165 6.43 75.01 7439 -- --
34.12 0.272 3.03 0.0862 0.0724 -0.098 -- -0.55 0.047 6.69 70.3 5897 -- --
34.33 0.273 3.04 0.0731 0.081 -0.157 -- -- -0.0099 6.75 83 7309 -- --
34.38 0.273 3.03 0.0874 -- -0.0974 -- -0.543 0.0484 -- 71 5846 -- --
34.8 0.277 3.02 0.0503 0.0725 -- -0.0766 -- 0.0539 6.48 -- -- -- --
34.81 0.276 3.02 0.0493 0.0722 -- -- -- 0.0542 6.58 -- -- -- --
34.61 0.274 3.04 0.0772 -- -0.165 -- -- -0.0107 -- 83 7256 -- --
34.47 0.273 3.04 -- 0.0786 -0.146 -- -- -0.00642 6.39 83 7319 -- --
35.08 0.277 3.03 0.0511 -- -- -- -- 0.0557 -- -- -- -- --
34.88 0.276 3.03 -- 0.0728 -- -- -- 0.0487 6.54 -- -- -- --
34.76 0.275 3.04 -- -- -0.148 -- -- -0.0122 -- 82.67 7256 -- --
35.15 0.277 3.03 -- -- -- -- -- 0.05 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.22 atmosphere 1000.0 10 > th dose independent rect. 21 23
5 31.42 humidity 90.0 10 < th dose dependent rect. 20 1
6 31.43 temperature 20.0 10 > th dose independent rect. 20 1
7 31.43 humidity 90.0 10 < th dose independent rect. 20 1
9 31.44 atmosphere 1005.0 10 > th dose independent rect. 20 1
10 31.45 wind 1.0 10 > th dose independent rect. 20 1
11 31.45 wind 5.0 10 < th dose independent rect. 20 1
12 31.45 wind 9.0 10 < th dose independent rect. 20 1
13 31.45 temperature 10.0 10 > th dose independent rect. 20 1
15 31.45 temperature 30.0 10 < th dose independent rect. 20 1
16 31.45 humidity 50.0 10 > th dose independent rect. 20 1
19 31.45 atmosphere 995.0 10 > th dose independent rect. 20 1
21 31.45 atmosphere 1010.0 10 < th dose independent rect. 20 1
23 31.45 radiation 1.0 10 < th dose independent rect. 20 1
28 31.45 precipitation 0.1 10 < th dose independent rect. 20 1
29 31.45 temperature 10.0 10 > th dose independent rect. 21 23
30 31.45 wind 9.0 10 < th dose dependent rect. 20 1
31 31.45 temperature 30.0 30 < th dose dependent rect. 20 1
32 31.45 radiation 1.0 10 < th dose dependent rect. 20 1
37 31.45 precipitation 0.1 10 < th dose dependent rect. 20 1
40 31.46 atmosphere 995.0 10 > th dose dependent rect. 20 1
41 31.46 atmosphere 1010.0 30 < th dose dependent rect. 20 1
42 31.47 temperature 10.0 10 > th dose dependent rect. 20 1
48 31.48 radiation 1.0 1440 < th dose dependent rect. 21 1
82 31.50 humidity 50.0 10 > th dose dependent rect. 20 1
84 31.51 wind 1.0 30 > th dose dependent rect. 20 1
112 31.55 temperature 10.0 1440 > th dose independent rect. 21 1
115 31.55 temperature 30.0 1440 < th dose independent rect. 21 1
119 31.55 humidity 50.0 1440 > th dose independent rect. 21 1
125 31.55 atmosphere 995.0 1440 > th dose independent rect. 21 1
126 31.55 radiation 1.0 1440 < th dose independent rect. 21 1
146 31.55 temperature 10.0 1440 > th dose independent rect. 22 23
156 31.57 precipitation 0.1 10 < th dose independent rect. 21 23
158 31.57 precipitation 0.1 10 < th dose dependent rect. 21 23
177 31.94 wind 9.0 30 < th dose independent rect. 21 23
180 31.99 humidity 50.0 30 > th dose independent rect. 21 23
209 32.45 precipitation 0.1 1440 < th dose independent rect. 21 1
210 32.45 precipitation 0.1 1440 < th dose dependent rect. 21 1
267 32.79 temperature 30.0 30 < th dose independent rect. 21 23
319 33.00 wind 1.0 30 > th dose independent rect. 21 23
348 33.14 atmosphere 1015.0 30 < th dose independent rect. 21 23
374 33.27 precipitation 0.1 720 < th dose independent rect. 9 8
375 33.27 precipitation 0.1 720 < th dose independent rect. 5 16
377 33.27 precipitation 0.1 720 < th dose dependent rect. 9 8
378 33.27 precipitation 0.1 720 < th dose dependent rect. 5 16
391 33.32 atmosphere 995.0 720 > th dose independent rect. 17 16
395 33.33 radiation 10.0 10 > th dose independent rect. 6 1
418 33.33 atmosphere 1000.0 720 > th dose independent rect. 21 12
423 33.33 radiation 10.0 10 > th dose dependent rect. 6 1
441 33.33 radiation 1.0 720 < th dose dependent rect. 21 8
455 33.35 atmosphere 995.0 720 > th dose independent rect. 9 8
460 33.36 atmosphere 995.0 720 > th dose independent rect. 5 16
464 33.37 temperature 10.0 720 > th dose independent rect. 9 8
465 33.37 atmosphere 1015.0 720 < th dose independent rect. 9 8
466 33.37 temperature 10.0 720 > th dose independent rect. 17 16
469 33.38 wind 9.0 1440 < th dose independent rect. 21 1
509 33.39 temperature 10.0 720 > th dose independent rect. 21 8
510 33.39 temperature 30.0 720 < th dose independent rect. 21 8
511 33.39 humidity 50.0 720 > th dose independent rect. 21 8
514 33.39 atmosphere 995.0 720 > th dose independent rect. 21 8
515 33.39 radiation 1.0 720 < th dose independent rect. 21 8
516 33.39 radiation 20.0 720 < th dose independent rect. 21 8
519 33.39 temperature 10.0 720 > th dose independent rect. 5 16
552 33.42 radiation 10.0 30 < th dose dependent rect. 21 23
562 33.44 atmosphere 995.0 30 > th dose dependent rect. 21 23
574 33.48 atmosphere 1000.0 90 > th dose independent rect. 8 11
575 33.48 wind 1.0 720 > th dose independent rect. 9 12
579 33.49 wind 9.0 720 < th dose independent rect. 21 8
588 33.52 wind 1.0 10 < th dose independent rect. 2 1
591 33.52 wind 1.0 720 > th dose independent rect. 9 8
592 33.52 atmosphere 995.0 720 > th dose independent rect. 9 12
597 33.53 temperature 30.0 270 < th dose independent rect. 10 11
603 33.54 wind 1.0 30 < th dose dependent rect. 2 1
607 33.55 atmosphere 1000.0 720 > th dose independent rect. 7 2
638 33.57 wind 1.0 90 > th dose independent rect. 8 11
639 33.57 humidity 60.0 720 > th dose independent rect. 21 12
649 33.58 wind 1.0 720 > th dose independent rect. 19 2
651 33.58 atmosphere 1015.0 720 < th dose independent rect. 5 16
683 33.60 humidity 90.0 90 < th dose independent rect. 1 20
693 33.61 radiation 10.0 30 < th dose independent rect. 21 23
698 33.62 precipitation 0.1 720 < th dose independent rect. 15 16
703 33.62 wind 9.0 30 < th dose independent rect. 3 23
706 33.62 precipitation 0.1 720 < th dose dependent rect. 15 16
711 33.63 humidity 80.0 90 > th dose independent rect. 15 6
714 33.63 atmosphere 995.0 720 > th dose independent rect. 21 22
721 33.64 temperature 10.0 720 > th dose independent rect. 9 12
722 33.64 temperature 10.0 720 > th dose independent rect. 21 12
727 33.65 atmosphere 995.0 720 > th dose independent rect. 7 8
729 33.65 temperature 30.0 720 < th dose independent rect. 21 12
730 33.65 atmosphere 1015.0 30 < th dose dependent rect. 2 1
735 33.66 wind 9.0 720 < th dose independent rect. 21 12
746 33.67 temperature 25.0 30 < th dose independent rect. 2 1
747 33.67 wind 1.0 720 > th dose independent rect. 7 2
750 33.67 precipitation 0.1 720 < th dose independent rect. 19 8
751 33.67 precipitation 0.1 720 < th dose independent rect. 21 8
752 33.67 radiation 10.0 30 < th dose independent rect. 21 10
754 33.67 wind 7.0 90 < th dose independent rect. 19 13
756 33.67 atmosphere 995.0 720 > th dose independent rect. 9 22
759 33.67 atmosphere 1005.0 10 > th dose dependent rect. 2 1
763 33.67 precipitation 0.1 720 < th dose dependent rect. 19 8
764 33.67 precipitation 0.1 720 < th dose dependent rect. 21 8
769 33.68 temperature 10.0 30 > th dose independent rect. 2 1
772 33.68 humidity 50.0 30 > th dose independent rect. 2 1
776 33.68 atmosphere 995.0 30 > th dose independent rect. 2 1
777 33.68 atmosphere 1010.0 30 < th dose independent rect. 2 1
779 33.68 radiation 1.0 30 < th dose independent rect. 2 1
784 33.68 precipitation 0.1 30 < th dose independent rect. 2 1
786 33.68 humidity 60.0 720 > th dose independent rect. 7 2
794 33.68 temperature 10.0 30 > th dose independent rect. 3 23
795 33.68 temperature 10.0 30 > th dose dependent rect. 2 1
797 33.68 humidity 50.0 30 > th dose dependent rect. 2 1
800 33.68 radiation 1.0 30 < th dose dependent rect. 2 1
805 33.68 precipitation 0.1 30 < th dose dependent rect. 2 1
826 33.69 precipitation 0.1 90 < th dose independent rect. 19 13
830 33.69 temperature 30.0 30 < th dose dependent rect. 2 1
834 33.69 precipitation 0.1 90 < th dose dependent rect. 19 13
844 33.70 temperature 10.0 90 > th dose independent rect. 8 11
845 33.70 atmosphere 1015.0 90 < th dose independent rect. 8 11
846 33.70 atmosphere 1015.0 720 < th dose independent rect. 9 12
847 33.70 precipitation 0.1 720 < th dose independent rect. 9 12
849 33.70 temperature 10.0 90 > th dose independent rect. 19 13
850 33.70 temperature 30.0 90 < th dose independent rect. 19 13
851 33.70 humidity 50.0 90 > th dose independent rect. 19 13
853 33.70 atmosphere 995.0 90 > th dose independent rect. 19 13
854 33.70 precipitation 0.1 90 < th dose independent rect. 6 15
857 33.70 precipitation 0.1 720 < th dose independent rect. 9 22
859 33.70 atmosphere 995.0 30 > th dose dependent rect. 2 1
862 33.70 precipitation 0.1 720 < th dose dependent rect. 9 12
863 33.70 precipitation 0.1 90 < th dose dependent rect. 6 15
865 33.70 precipitation 0.1 720 < th dose dependent rect. 9 22
866 33.71 atmosphere 1005.0 30 > th dose independent rect. 2 1
885 33.71 precipitation 0.1 90 < th dose independent rect. 8 11
886 33.71 wind 9.0 720 < th dose independent rect. 9 12
891 33.71 atmosphere 995.0 720 > th dose dependent rect. 8 1
903 33.71 temperature 25.0 720 > th dose dependent rect. 22 11
904 33.71 precipitation 0.1 90 < th dose dependent rect. 8 11
925 33.72 radiation 40.0 90 < th dose independent rect. 19 13
942 33.73 wind 7.0 720 < th dose independent rect. 19 2
963 33.73 humidity 50.0 90 > th dose independent rect. 8 11
976 33.73 humidity 90.0 90 < th dose dependent rect. 2 5