Os02g0573500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Monosaccharide transporter 1.
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Os02g0573500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Monosaccharide transporter 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.43 | 0.599 | 9.94 | 2.57 | 1.89 | -1.82 | -2.28 | 1.52 | -0.229 | 0.532 | 23.6 | 1467 | -- | -- |
| 161.75 | 0.592 | 9.99 | 2.33 | 1.9 | -1.8 | -2.14 | -- | -0.312 | 0.446 | 22.35 | 5628 | -- | -- |
| 184.17 | 0.632 | 9.95 | 2.55 | 1.88 | -1.8 | -- | 1.18 | -0.237 | 0.335 | 23.58 | 1486 | -- | -- |
| 182.01 | 0.628 | 9.98 | 2.4 | 1.93 | -1.87 | -- | -- | -0.295 | 0.347 | 22.45 | 5528 | -- | -- |
| 283.49 | 0.788 | 9.85 | 2.94 | -- | -3.16 | -- | 5.66 | -0.0183 | -- | 23.2 | 1624 | -- | -- |
| 272.78 | 0.774 | 10.1 | 1.5 | 1.78 | -- | -2.39 | -- | -0.678 | 0.471 | -- | -- | -- | -- |
| 296.68 | 0.807 | 10.1 | 1.59 | 1.79 | -- | -- | -- | -0.664 | 0.246 | -- | -- | -- | -- |
| 296.89 | 0.806 | 9.94 | 2.16 | -- | -2.84 | -- | -- | -0.219 | -- | 22.45 | 5528 | -- | -- |
| 300.77 | 0.808 | 10.1 | -- | 1.94 | -1.11 | -- | -- | -0.721 | 0.498 | 27.8 | 7032 | -- | -- |
| 498.47 | 1.04 | 10 | 1.65 | -- | -- | -- | -- | -0.636 | -- | -- | -- | -- | -- |
| 363.37 | 0.892 | 10.1 | -- | 1.81 | -- | -- | -- | -0.841 | 0.293 | -- | -- | -- | -- |
| 416.3 | 0.953 | 10 | -- | -- | -2.44 | -- | -- | -0.51 | -- | 22.45 | 5528 | -- | -- |
| 570.24 | 1.11 | 10.1 | -- | -- | -- | -- | -- | -0.819 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 156.78 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 2 | 156.87 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 3 | 157.34 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 5 | 157.57 | temperature | 25 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 9 | 157.83 | temperature | 25 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 20 | 158.52 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 22 | 158.53 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 53 | 159.56 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 54 | 159.60 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 16 |
| 77 | 160.04 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 98 | 160.41 | temperature | 20 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 109 | 160.69 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 134 | 161.03 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 138 | 161.11 | temperature | 25 | 14400 | < th | dose independent | sin | 11 | NA |
| 139 | 161.11 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 10 |
| 148 | 161.19 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 7 |
| 154 | 161.22 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 178 | 161.32 | temperature | 25 | 14400 | > th | dose dependent | sin | 7 | NA |
| 185 | 161.35 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 200 | 161.40 | temperature | 25 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 254 | 161.67 | temperature | 20 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 273 | 161.75 | temperature | 20 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 274 | 161.75 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 4 |
| 277 | 161.76 | temperature | 25 | 14400 | > th | dose dependent | sin | 14 | NA |
| 279 | 161.78 | temperature | 25 | 14400 | > th | dose independent | sin | 11 | NA |
| 326 | 161.95 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 20 |
| 360 | 162.01 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 361 | 162.01 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 9 |
| 376 | 162.03 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 383 | 162.05 | temperature | 30 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 402 | 162.09 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 4 |
| 447 | 162.20 | temperature | 25 | 14400 | > th | dose dependent | rect. | 21 | 23 |
| 472 | 162.30 | temperature | 30 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 643 | 162.77 | temperature | 20 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 764 | 163.05 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 803 | 163.15 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 819 | 163.17 | temperature | 30 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 821 | 163.18 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 828 | 163.19 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 21 |
| 840 | 163.20 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 18 |
| 854 | 163.23 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 893 | 163.30 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 21 |
| 928 | 163.35 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |