Os02g0573000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0573000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 496.89 | 1.05 | 3.54 | 3.54 | 0.313 | -1.63 | 0.647 | 6.58 | 0.338 | 0.321 | 26.36 | 1269 | -- | -- |
| 508.31 | 1.05 | 3.73 | 2.03 | 0.368 | -1.04 | 0.873 | -- | 0.14 | 23.7 | 22.71 | 2292 | -- | -- |
| 498.26 | 1.04 | 3.54 | 3.54 | 0.314 | -1.61 | -- | 6.36 | 0.417 | 0.866 | 25.69 | 1264 | -- | -- |
| 510.31 | 1.05 | 3.71 | 2.02 | 0.296 | -1.06 | -- | -- | 0.196 | 22.9 | 21.98 | 2080 | -- | -- |
| 503.34 | 1.04 | 3.53 | 3.47 | -- | -1.44 | -- | 5.67 | 0.403 | -- | 25.74 | 1399 | -- | -- |
| 542.72 | 1.09 | 3.75 | 1.64 | 0.149 | -- | 0.714 | -- | -0.0406 | 23.2 | -- | -- | -- | -- |
| 544.73 | 1.09 | 3.75 | 1.61 | 0.155 | -- | -- | -- | -0.0446 | 0.63 | -- | -- | -- | -- |
| 509.99 | 1.05 | 3.7 | 2.07 | -- | -1.03 | -- | -- | 0.187 | -- | 22.2 | 5895 | -- | -- |
| 601.94 | 1.14 | 3.78 | -- | 0.334 | -0.676 | -- | -- | -0.133 | 22.8 | 22.7 | 787 | -- | -- |
| 546.23 | 1.09 | 3.75 | 1.62 | -- | -- | -- | -- | -0.0419 | -- | -- | -- | -- | -- |
| 613.14 | 1.16 | 3.79 | -- | 0.18 | -- | -- | -- | -0.224 | 1.06 | -- | -- | -- | -- |
| 598.63 | 1.14 | 3.81 | -- | -- | -0.729 | -- | -- | -0.347 | -- | 31.2 | 1807 | -- | -- |
| 615.16 | 1.16 | 3.79 | -- | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 487.77 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 25 | 492.92 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 15 |
| 47 | 493.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 64 | 493.78 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 65 | 493.79 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 69 | 494.14 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 84 | 494.40 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 90 | 494.72 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 17 | NA |
| 93 | 494.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 100 | 495.00 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 122 | 495.30 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 124 | 495.31 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 141 | 495.73 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 166 | 496.34 | wind | 5.0 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 168 | 496.36 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 179 | 496.62 | wind | 5.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 182 | 496.63 | wind | 5.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 183 | 496.64 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 190 | 496.82 | wind | 5.0 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 196 | 496.87 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 200 | 496.98 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 206 | 497.03 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 21 |
| 208 | 497.04 | wind | 5.0 | 43200 | > th | dose independent | rect. | 4 | 18 |
| 238 | 497.26 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 17 |
| 241 | 497.27 | wind | 5.0 | 43200 | < th | dose independent | rect. | 4 | 21 |
| 244 | 497.29 | wind | 5.0 | 43200 | < th | dose independent | rect. | 4 | 18 |
| 272 | 497.40 | wind | 5.0 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 280 | 497.44 | wind | 5.0 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 297 | 497.49 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 304 | 497.52 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 17 |
| 314 | 497.55 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 320 | 497.58 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 341 | 497.67 | wind | 5.0 | 43200 | > th | dose independent | no | NA | NA |
| 372 | 497.78 | wind | 5.0 | 43200 | < th | dose independent | no | NA | NA |
| 377 | 497.78 | wind | 5.0 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 389 | 497.83 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 403 | 497.89 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 411 | 497.90 | wind | 5.0 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 449 | 498.04 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 450 | 498.05 | wind | 5.0 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 453 | 498.07 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 464 | 498.12 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 481 | 498.18 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 21 |
| 486 | 498.20 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 522 | 498.29 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 17 |
| 523 | 498.29 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 6 | 20 |
| 529 | 498.31 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 541 | 498.34 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 18 |
| 578 | 498.41 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 13 |
| 606 | 498.46 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 22 |
| 636 | 498.52 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 638 | 498.52 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 6 | 16 |
| 685 | 498.57 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 734 | 498.67 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 764 | 498.75 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 785 | 498.84 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 833 | 498.98 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 8 |
| 845 | 499.01 | wind | 5.0 | 43200 | > th | dose dependent | no | NA | NA |
| 916 | 499.24 | wind | 5.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 946 | 499.34 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 983 | 499.51 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 990 | 499.55 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 996 | 499.57 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 6 | 10 |