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Os02g0572000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.02 (0.0303) R2 : 0.724
β1 : 1.18 (0.111) R2dD : 0.071 R2D : 0.0821
β2 : 2.57 (0.0791) R2dC : 0.643 R2C : 0.642
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.152 (0.0647) R2dN8 : 0.00445 R2N8 : 0.00404
σ : 0.57
deviance : 148.23
__
_____
C
peak time of C : 6.43
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
132.5 0.541 7 1.25 2.6 -1.86 -0.635 -3.65 -0.236 5.94 0.4448 1528 -- --
137.72 0.547 7.06 0.993 2.6 -1.05 -0.604 -- -0.288 6.01 1.023 1551 -- --
133.45 0.538 7 1.25 2.59 -1.92 -- -3.82 -0.245 5.96 0.4343 1521 -- --
138.71 0.549 7.05 0.956 2.59 -1.09 -- -- -0.283 6.06 0.9731 1548 -- --
469.1 1.01 7.07 1.23 -- -0.448 -- -0.18 -0.102 -- 0.3801 1475 -- --
147.41 0.569 7.02 1.19 2.57 -- -0.574 -- -0.154 6.41 -- -- -- --
148.23 0.57 7.02 1.18 2.57 -- -- -- -0.152 6.43 -- -- -- --
469.31 1.01 7.07 1.23 -- -0.449 -- -- -0.103 -- 0.3801 1475 -- --
160.3 0.59 7.07 -- 2.61 -1.51 -- -- -0.36 6.1 0.2924 1518 -- --
491.37 1.04 7.07 1.25 -- -- -- -- -0.0975 -- -- -- -- --
184.91 0.636 7.05 -- 2.59 -- -- -- -0.283 6.4 -- -- -- --
500.01 1.04 7.13 -- -- -1.66 -- -- -0.396 -- 0.92 1474 -- --
532.29 1.08 7.1 -- -- -- -- -- -0.236 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 128.16 temperature 20.0 720 > th dose dependent rect. 2 5
2 128.24 temperature 20.0 720 > th dose dependent rect. 4 2
7 128.78 temperature 10.0 270 > th dose dependent rect. 2 15
25 130.76 temperature 30.0 270 < th dose independent rect. 6 19
26 130.80 temperature 10.0 720 > th dose dependent rect. 1 6
32 131.05 temperature 30.0 270 < th dose independent rect. 5 21
49 131.52 humidity 50.0 270 > th dose dependent rect. 16 9
51 131.73 humidity 50.0 270 > th dose independent rect. 16 10
56 131.93 radiation 20.0 270 < th dose independent rect. 16 10
61 132.02 wind 7.0 30 < th dose independent rect. 14 17
65 132.05 precipitation 0.1 270 < th dose independent rect. 2 14
67 132.05 precipitation 0.1 270 < th dose dependent rect. 2 14
74 132.09 temperature 30.0 270 < th dose independent rect. 6 17
79 132.21 temperature 30.0 270 < th dose independent rect. 16 9
84 132.30 radiation 40.0 270 < th dose dependent rect. 16 10
91 132.43 temperature 30.0 270 < th dose independent rect. 6 15
101 132.56 wind 7.0 270 < th dose independent rect. 1 15
112 132.71 atmosphere 1000.0 270 > th dose independent rect. 17 9
115 132.75 precipitation 0.1 10 < th dose independent rect. 14 17
116 132.75 precipitation 0.1 10 < th dose dependent rect. 14 17
123 132.85 wind 7.0 270 < th dose independent rect. 11 19
129 132.90 temperature 15.0 270 > th dose independent rect. 6 5
153 133.07 temperature 10.0 270 > th dose independent rect. 16 10
156 133.07 temperature 10.0 270 > th dose independent rect. 2 14
157 133.07 atmosphere 1015.0 270 < th dose independent rect. 2 14
161 133.10 temperature 20.0 720 > th dose independent rect. 4 1
163 133.10 radiation 1.0 30 > th dose independent rect. 12 19
164 133.11 precipitation 0.1 270 < th dose independent rect. 11 19
165 133.11 precipitation 0.1 270 < th dose dependent rect. 11 19
179 133.26 wind 7.0 30 < th dose independent rect. 12 19
182 133.29 temperature 20.0 720 > th dose dependent sin 7 NA
183 133.30 temperature 30.0 270 < th dose dependent rect. 7 1
187 133.33 temperature 30.0 270 < th dose independent rect. 6 5
190 133.34 wind 9.0 270 < th dose independent rect. 16 10
201 133.40 radiation 40.0 30 < th dose independent rect. 14 17
203 133.41 wind 9.0 10 < th dose independent rect. 7 7
211 133.45 humidity 50.0 270 > th dose independent rect. 1 14
216 133.48 wind 9.0 270 < th dose independent rect. 6 5
219 133.49 precipitation 0.1 270 < th dose independent rect. 6 5
220 133.49 precipitation 0.1 270 < th dose dependent rect. 6 5
227 133.55 atmosphere 995.0 270 > th dose independent rect. 6 5
228 133.55 atmosphere 1015.0 270 < th dose independent rect. 6 5
229 133.55 temperature 10.0 270 > th dose independent rect. 11 19
232 133.56 precipitation 0.1 10 < th dose independent rect. 12 19
234 133.56 precipitation 0.1 10 < th dose dependent rect. 12 19
236 133.57 temperature 10.0 10 > th dose dependent rect. 2 18
247 133.64 temperature 30.0 720 < th dose dependent rect. 23 10
248 133.65 precipitation 0.1 270 < th dose independent rect. 16 10
250 133.65 precipitation 0.1 270 < th dose dependent rect. 16 10
259 133.74 radiation 1.0 30 > th dose independent rect. 14 17
263 133.75 radiation 1.0 30 < th dose independent sin 13 NA
271 133.78 temperature 20.0 720 > th dose independent rect. 3 4
274 133.81 temperature 15.0 10 > th dose independent rect. 14 17
277 133.82 atmosphere 995.0 270 > th dose independent rect. 2 14
283 133.86 temperature 10.0 720 > th dose dependent rect. 21 10
284 133.86 temperature 20.0 720 > th dose dependent rect. 21 16
288 133.88 wind 5.0 270 < th dose independent rect. 1 5
293 133.90 humidity 50.0 270 > th dose independent rect. 6 5
296 133.90 temperature 10.0 720 > th dose dependent rect. 21 16
298 133.91 temperature 10.0 10 > th dose independent rect. 7 7
300 133.91 atmosphere 995.0 10 > th dose independent rect. 7 7
301 133.91 atmosphere 1015.0 10 < th dose independent rect. 7 7
305 133.93 precipitation 0.1 10 < th dose independent rect. 7 7
306 133.93 precipitation 0.1 10 < th dose dependent rect. 7 7
325 133.99 wind 9.0 10 < th dose independent rect. 7 5
333 134.02 temperature 15.0 270 > th dose dependent rect. 11 6
334 134.02 temperature 10.0 270 > th dose dependent rect. 10 8
342 134.03 temperature 20.0 720 > th dose dependent rect. 23 14
344 134.04 temperature 20.0 720 > th dose dependent rect. 1 12
350 134.07 wind 9.0 270 < th dose independent rect. 10 21
352 134.08 temperature 25.0 720 < th dose dependent rect. 3 4
353 134.08 temperature 25.0 270 > th dose dependent rect. 11 5
358 134.11 temperature 20.0 270 > th dose independent rect. 17 8
364 134.12 temperature 25.0 270 < th dose independent rect. 7 1
365 134.12 precipitation 0.1 270 < th dose independent rect. 10 21
366 134.12 precipitation 0.1 270 < th dose dependent rect. 10 21
367 134.13 temperature 15.0 270 > th dose independent rect. 7 3
370 134.13 temperature 10.0 1440 > th dose independent rect. 8 7
373 134.13 temperature 10.0 1440 > th dose independent rect. 15 17
379 134.16 temperature 15.0 30 > th dose independent rect. 12 19
382 134.17 temperature 30.0 270 < th dose independent rect. 17 18
386 134.18 radiation 10.0 270 < th dose independent sin 9 NA
396 134.21 temperature 10.0 720 > th dose dependent rect. 2 11
402 134.23 temperature 15.0 10 > th dose dependent rect. 12 8
404 134.24 temperature 10.0 720 > th dose dependent sin 7 NA
420 134.28 temperature 30.0 10 < th dose independent rect. 7 7
443 134.34 wind 3.0 30 < th dose independent rect. 2 5
449 134.35 radiation 10.0 270 < th dose dependent sin 8 NA
470 134.42 radiation 1.0 270 > th dose independent rect. 10 20
475 134.44 wind 1.0 30 > th dose independent rect. 7 7
481 134.45 temperature 10.0 720 > th dose dependent rect. 19 14
483 134.46 radiation 1.0 10 > th dose dependent rect. 7 5
488 134.49 temperature 10.0 30 > th dose independent rect. 7 5
490 134.49 atmosphere 995.0 30 > th dose independent rect. 7 5
491 134.49 atmosphere 1015.0 30 < th dose independent rect. 7 5
497 134.49 radiation 1.0 30 < th dose dependent sin 13 NA
499 134.50 temperature 30.0 270 < th dose independent rect. 7 3
500 134.50 temperature 10.0 1440 > th dose independent rect. 8 5
503 134.50 atmosphere 995.0 1440 > th dose independent rect. 8 5
504 134.50 precipitation 0.1 30 < th dose independent rect. 7 5
505 134.50 temperature 10.0 1440 > th dose independent rect. 13 19
508 134.50 precipitation 0.1 30 < th dose dependent rect. 7 5
512 134.51 wind 1.0 270 > th dose independent rect. 6 5
513 134.51 radiation 1.0 270 > th dose independent rect. 6 5
517 134.52 radiation 20.0 10 < th dose independent rect. 2 7
523 134.53 wind 3.0 30 < th dose independent rect. 2 7
537 134.55 atmosphere 995.0 10 > th dose independent rect. 14 17
539 134.56 precipitation 0.1 270 < th dose independent rect. 7 3
541 134.56 precipitation 0.1 270 < th dose dependent rect. 7 3
546 134.57 radiation 10.0 270 < th dose independent rect. 1 5
557 134.59 wind 9.0 270 < th dose independent rect. 7 3
562 134.60 atmosphere 995.0 270 > th dose independent rect. 7 3
563 134.60 atmosphere 1015.0 270 < th dose independent rect. 7 3
565 134.60 temperature 10.0 270 > th dose independent rect. 10 21
575 134.63 atmosphere 1010.0 270 < th dose independent rect. 17 8
579 134.64 radiation 1.0 270 > th dose independent rect. 7 3
580 134.64 temperature 30.0 270 < th dose dependent rect. 6 4
593 134.68 temperature 30.0 90 < th dose independent rect. 9 17
604 134.70 humidity 50.0 270 > th dose independent rect. 7 3
621 134.73 radiation 1.0 30 > th dose independent rect. 7 5
628 134.74 temperature 25.0 270 > th dose independent rect. 11 6
638 134.77 precipitation 0.1 270 < th dose independent rect. 1 5
640 134.77 precipitation 0.1 270 < th dose dependent rect. 1 5
645 134.78 wind 5.0 270 < th dose independent rect. 2 3
655 134.81 wind 9.0 270 < th dose dependent rect. 1 5
665 134.84 radiation 10.0 270 < th dose dependent rect. 11 14
668 134.85 radiation 1.0 30 > th dose independent rect. 12 21
681 134.88 temperature 20.0 30 > th dose independent rect. 7 19
686 134.89 humidity 50.0 270 > th dose independent rect. 6 19
690 134.90 atmosphere 995.0 270 > th dose independent rect. 11 19
694 134.92 radiation 1.0 10 > th dose independent rect. 7 7
697 134.93 wind 1.0 30 > th dose independent rect. 7 5
731 134.97 radiation 1.0 1440 < th dose dependent rect. 20 9
745 135.00 wind 5.0 270 < th dose independent rect. 23 7
748 135.00 atmosphere 1015.0 270 < th dose independent rect. 6 19
765 135.03 wind 1.0 270 > th dose independent rect. 7 3
773 135.05 atmosphere 995.0 30 > th dose independent rect. 12 19
804 135.12 atmosphere 1000.0 30 > th dose independent rect. 7 21
805 135.12 radiation 10.0 270 < th dose dependent rect. 1 5
806 135.12 wind 9.0 270 < th dose dependent rect. 17 8
822 135.15 radiation 1.0 30 > th dose independent sin 13 NA
831 135.17 atmosphere 1010.0 270 < th dose independent rect. 1 5
843 135.18 atmosphere 1000.0 30 > th dose independent rect. 7 19
856 135.19 temperature 10.0 270 > th dose dependent rect. 11 19
876 135.24 temperature 30.0 270 < th dose dependent rect. 6 8
882 135.24 temperature 10.0 270 > th dose dependent rect. 10 21
898 135.27 humidity 80.0 10 > th dose independent rect. 18 8
906 135.28 radiation 1.0 270 < th dose independent rect. 5 21
913 135.29 temperature 10.0 10 > th dose dependent rect. 2 5
919 135.30 wind 7.0 30 < th dose independent rect. 12 21
920 135.31 precipitation 0.1 270 < th dose independent rect. 2 3
921 135.31 temperature 10.0 270 > th dose independent rect. 1 5
923 135.31 temperature 30.0 270 < th dose independent rect. 1 5
924 135.31 humidity 50.0 270 > th dose independent rect. 1 5
927 135.31 atmosphere 995.0 270 > th dose independent rect. 1 5
933 135.31 temperature 20.0 30 > th dose independent rect. 9 17
934 135.31 temperature 10.0 270 > th dose independent rect. 6 19
935 135.31 radiation 1.0 90 < th dose independent rect. 7 20
937 135.31 humidity 50.0 270 > th dose independent rect. 5 21
938 135.31 precipitation 0.1 270 < th dose dependent rect. 2 3
953 135.33 temperature 20.0 4320 > th dose dependent rect. 2 1
959 135.34 atmosphere 995.0 270 > th dose independent rect. 6 19
960 135.34 wind 9.0 270 < th dose dependent rect. 2 3
966 135.34 radiation 1.0 90 < th dose dependent rect. 6 21
981 135.37 radiation 20.0 10 > th dose independent rect. 16 20
986 135.38 atmosphere 1000.0 10 > th dose independent rect. 20 16
993 135.39 radiation 20.0 10 > th dose independent rect. 7 5