Os02g0571900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0571900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 369.87 | 0.904 | 7.02 | 3.84 | 3.16 | 2.22 | -0.215 | 0.985 | 0.247 | 7.46 | 26.36 | 4393 | -- | -- |
| 370.79 | 0.897 | 6.99 | 4.03 | 3.14 | 2.13 | -0.171 | -- | 0.28 | 7.45 | 27.25 | 4428 | -- | -- |
| 369.99 | 0.896 | 7.02 | 3.83 | 3.15 | 2.22 | -- | 0.999 | 0.247 | 7.46 | 26.4 | 4404 | -- | -- |
| 370.83 | 0.897 | 6.99 | 4 | 3.16 | 2.08 | -- | -- | 0.276 | 7.45 | 27.3 | 4391 | -- | -- |
| 677.2 | 1.21 | 6.98 | 3.78 | -- | 3.75 | -- | 0.0724 | 0.437 | -- | 34.99 | 566 | -- | -- |
| 443.93 | 0.988 | 7.1 | 2.99 | 3.12 | -- | -0.134 | -- | -0.226 | 7.54 | -- | -- | -- | -- |
| 443.98 | 0.987 | 7.1 | 2.98 | 3.12 | -- | -- | -- | -0.226 | 7.55 | -- | -- | -- | -- |
| 668.33 | 1.2 | 7.03 | 4.04 | -- | 4.4 | -- | -- | 0.463 | -- | 43.71 | 551 | -- | -- |
| 596.38 | 1.14 | 7.25 | -- | 3.12 | -1.5 | -- | -- | -0.923 | 7.56 | 22.81 | 47520 | -- | -- |
| 966.7 | 1.45 | 7.17 | 3.03 | -- | -- | -- | -- | -0.177 | -- | -- | -- | -- | -- |
| 678.64 | 1.22 | 7.17 | -- | 3.15 | -- | -- | -- | -0.558 | 7.48 | -- | -- | -- | -- |
| 1060.94 | 1.52 | 7.17 | -- | -- | 2.98 | -- | -- | -0.158 | -- | 87.59 | 509 | -- | -- |
| 1208.84 | 1.62 | 7.25 | -- | -- | -- | -- | -- | -0.514 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 354.25 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 2 | 354.52 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 10 |
| 8 | 355.07 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 11 | 355.13 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 4 |
| 18 | 355.29 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 5 | 4 |
| 28 | 355.65 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 34 | 355.82 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 5 | 8 |
| 56 | 356.34 | humidity | 90.0 | 43200 | < th | dose independent | sin | 1 | NA |
| 90 | 356.88 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 92 | 356.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 101 | 356.99 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 103 | 356.99 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 111 | 357.06 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 113 | 357.06 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 121 | 357.17 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 141 | 357.52 | humidity | 90.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 142 | 357.54 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 172 | 357.93 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 187 | 358.08 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 195 | 358.13 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 198 | 358.14 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 202 | 358.19 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 214 | 358.27 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 215 | 358.27 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 217 | 358.29 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 220 | 358.30 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 17 | 14 |
| 228 | 358.37 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 248 | 358.47 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 262 | 358.54 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 276 | 358.61 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 18 | 5 |
| 280 | 358.62 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 311 | 358.72 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 11 |
| 314 | 358.73 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 0 | NA |
| 321 | 358.78 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 13 | 11 |
| 333 | 358.81 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 368 | 358.96 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 420 | 359.17 | atmosphere | 1015.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 425 | 359.19 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 456 | 359.32 | atmosphere | 1015.0 | 43200 | > th | dose independent | rect. | 12 | 13 |
| 458 | 359.32 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 4 | 5 |
| 485 | 359.42 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 12 | 8 |
| 514 | 359.49 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 558 | 359.62 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 560 | 359.62 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 583 | 359.68 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 8 |
| 601 | 359.72 | atmosphere | 1010.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 616 | 359.75 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 17 | 12 |
| 618 | 359.76 | atmosphere | 1015.0 | 43200 | > th | dose independent | sin | 16 | NA |
| 620 | 359.77 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 732 | 360.06 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 10 |
| 738 | 360.08 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 755 | 360.09 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 835 | 360.26 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 841 | 360.27 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 889 | 360.35 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 6 |
| 907 | 360.37 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 932 | 360.41 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 9 | 5 |
| 946 | 360.43 | atmosphere | 1015.0 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 949 | 360.44 | radiation | 1.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 969 | 360.46 | atmosphere | 1015.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 987 | 360.49 | atmosphere | 1015.0 | 43200 | < th | dose independent | no | NA | NA |
| 994 | 360.50 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 17 | 19 |