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Os02g0571800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.3 (0.237) R2 : 0.55
β1 : 15.1 (2.24) R2dD : 11.8 R2D : -13.5
β2 : 1.01 (0.107) R2dC : 0.101 R2C : -2.59
β3 : -10.8 (1.87) R2dE : 11.1 R2E : -16.1
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 113 (17.8) R2dD*E : 22.2 R2D*E : -19
γ1 : 1.25 (0.0832) R2dN8 : 0.307 R2N8 : -1.87
σ : 0.716
deviance : 236.44
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C
peak time of C : 5.3
E
wheather : humidity
threshold : 51
memory length : 1352
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 16.1
open length of G : 1.02

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
236.11 0.722 4.31 15 1.01 -10.7 0.368 113 1.25 5.33 51 1369 16.1 1.03
313.16 0.831 5.83 1.1 1.3 -0.572 1.08 -- 1.07 5.28 65.59 47520 13.9 1.42
236.44 0.716 4.3 15.1 1.01 -10.8 -- 113 1.25 5.3 51 1352 16.1 1.02
266.86 0.761 5.94 0.526 1.31 1.35 -- -- 0.582 5.29 78.22 47520 13 2.75
285.11 0.786 4.3 15.2 -- -10.8 -- 115 1.33 -- 51.99 1252 16.2 0.977
315.93 0.833 5.83 1.09 1.33 -- 1.11 -- 1.09 5.2 -- -- -- --
318.99 0.836 5.83 1.09 1.34 -- -- -- 1.08 5.16 -- -- -- --
355.99 0.879 5.96 0.534 -- 1.39 -- -- 0.591 -- 79 47520 13 2.66
266.84 0.761 5.97 -- 1.34 1.58 -- -- 0.444 5.29 80 47520 11.7 3.45
412.97 0.95 5.85 1.14 -- -- -- -- 1.12 -- -- -- -- --
350.33 0.876 5.86 -- 1.36 -- -- -- 0.96 5.13 -- -- -- --
349.93 0.871 5.99 -- -- 1.62 -- -- 0.458 -- 80.56 47359 11.7 2.73
447.12 0.987 5.87 -- -- -- -- -- 0.989 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 238.90 temperature 30 720 > th dose dependent rect. 18 1
30 243.57 humidity 50 1440 < th dose independent rect. 16 1
31 243.94 humidity 50 1440 < th dose dependent rect. 16 1
32 248.30 humidity 70 720 < th dose dependent rect. 18 13
33 248.38 humidity 70 720 < th dose dependent rect. 18 2
44 248.42 temperature 30 720 > th dose independent rect. 18 1
58 248.56 humidity 60 720 < th dose independent rect. 18 1
87 249.05 humidity 50 1440 > th dose independent rect. 16 1
114 250.79 temperature 25 720 > th dose dependent rect. 20 3
119 252.28 wind 5 43200 > th dose dependent rect. 12 1
120 252.42 humidity 70 720 > th dose independent rect. 19 8
137 252.76 radiation 1 14400 < th dose dependent rect. 23 6
140 253.25 radiation 30 14400 > th dose independent rect. 16 1
157 253.49 humidity 50 1440 > th dose independent rect. 16 11
159 253.54 humidity 50 1440 > th dose independent rect. 16 9
180 253.90 humidity 50 1440 > th dose independent rect. 16 16
204 254.15 humidity 50 1440 > th dose independent rect. 16 4
247 254.63 radiation 40 14400 > th dose dependent rect. 15 18
283 255.06 radiation 40 1440 > th dose dependent rect. 13 20
300 255.10 temperature 30 1440 < th dose independent rect. 18 8
301 255.14 wind 1 90 < th dose independent rect. 4 1
306 255.22 wind 5 43200 > th dose dependent rect. 11 3
326 255.38 radiation 40 1440 > th dose dependent rect. 13 3
351 255.88 wind 7 43200 < th dose independent rect. 12 1
355 256.01 humidity 90 43200 > th dose dependent rect. 22 2
356 256.02 wind 5 43200 > th dose independent rect. 11 2
379 256.39 radiation 40 14400 > th dose independent rect. 15 17
380 256.49 temperature 30 1440 < th dose independent rect. 18 14
431 256.81 humidity 90 43200 > th dose dependent rect. 20 4
438 256.94 radiation 30 14400 > th dose dependent rect. 16 1
458 257.11 radiation 40 14400 > th dose dependent rect. 8 1
460 257.14 temperature 30 1440 < th dose independent rect. 18 2
505 257.50 wind 1 90 < th dose dependent rect. 4 1
508 257.53 humidity 90 43200 > th dose independent rect. 22 2
567 257.84 radiation 1 43200 < th dose dependent rect. 4 1
573 257.89 wind 1 43200 < th dose dependent rect. 7 1
580 258.02 radiation 1 14400 < th dose dependent rect. 18 1
591 258.22 radiation 10 1440 < th dose dependent rect. 18 9
595 258.28 radiation 1 1440 < th dose dependent rect. 18 11
598 258.31 radiation 40 14400 < th dose dependent rect. 18 9
614 258.37 radiation 1 43200 > th dose independent rect. 18 1
665 258.76 temperature 30 1440 > th dose dependent sin 12 NA
673 258.88 radiation 1 1440 < th dose dependent rect. 18 7
686 259.07 radiation 1 720 > th dose independent rect. 18 11
689 259.08 atmosphere 1005 43200 > th dose independent rect. 15 2
709 259.23 humidity 90 43200 > th dose dependent sin 15 NA
719 259.32 radiation 1 1440 < th dose dependent rect. 18 1
736 259.44 radiation 10 14400 > th dose independent rect. 5 1
754 259.52 radiation 1 43200 < th dose independent rect. 18 9
761 259.57 radiation 1 43200 < th dose independent rect. 18 7
777 259.58 radiation 1 43200 < th dose independent rect. 18 1
779 259.58 radiation 1 720 > th dose dependent rect. 18 11
801 259.71 radiation 1 720 > th dose independent rect. 18 1
853 259.90 humidity 90 43200 > th dose dependent rect. 12 18
855 259.92 radiation 1 43200 < th dose dependent rect. 6 1
865 259.95 wind 7 43200 < th dose independent rect. 5 9
928 260.16 atmosphere 1005 43200 > th dose independent rect. 18 1
962 260.27 humidity 90 43200 > th dose dependent rect. 2 23
974 260.32 wind 7 43200 > th dose independent rect. 4 10