Os02g0571300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0571300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Terpenoid cylases/protein prenyltransferase alpha-alpha toroid domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 196.7 | 0.659 | 9.82 | -2.38 | 1.14 | 2.37 | 1.31 | -6.37 | 0.213 | 4.51 | 23.74 | 1265 | -- | -- |
| 205.6 | 0.668 | 9.71 | -1.32 | 1.28 | 2.25 | 0.893 | -- | 0.215 | 4.04 | 17.3 | 8451 | -- | -- |
| 200.82 | 0.66 | 9.81 | -2.3 | 1.15 | 2.35 | -- | -6.06 | 0.229 | 4.23 | 23.8 | 1283 | -- | -- |
| 207.69 | 0.671 | 9.72 | -1.35 | 1.28 | 2.28 | -- | -- | 0.203 | 3.86 | 17.28 | 8462 | -- | -- |
| 269.58 | 0.765 | 9.82 | -2.3 | -- | 2.59 | -- | -6.03 | 0.243 | -- | 23.85 | 1244 | -- | -- |
| 322.68 | 0.842 | 9.54 | -0.0489 | 1.4 | -- | 0.951 | -- | 0.995 | 3.86 | -- | -- | -- | -- |
| 325.18 | 0.844 | 9.54 | -0.0624 | 1.4 | -- | -- | -- | 0.99 | 3.72 | -- | -- | -- | -- |
| 294.34 | 0.799 | 9.63 | -0.728 | -- | 1.97 | -- | -- | 0.542 | -- | 22.4 | 2659 | -- | -- |
| 237.1 | 0.717 | 9.58 | -- | 1.31 | 1.87 | -- | -- | 0.504 | 4.26 | 24.7 | 8165 | -- | -- |
| 434.18 | 0.974 | 9.54 | -0.0039 | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
| 325.28 | 0.844 | 9.54 | -- | 1.4 | -- | -- | -- | 0.997 | 3.72 | -- | -- | -- | -- |
| 306.82 | 0.816 | 9.61 | -- | -- | 1.77 | -- | -- | 0.75 | -- | 22.7 | 2668 | -- | -- |
| 434.18 | 0.973 | 9.54 | -- | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 186.67 | humidity | 90 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 2 | 187.89 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 8 | 189.14 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 10 | 189.82 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 20 | 190.00 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 28 | 190.83 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 36 | 191.41 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 37 | 191.45 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 44 | 191.57 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 50 | 191.80 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 54 | 191.86 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 56 | 191.87 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 58 | 191.87 | radiation | 1 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 73 | 192.68 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 79 | 192.75 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 81 | 192.90 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 83 | 193.02 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 84 | 193.05 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 86 | 193.09 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 88 | 193.14 | wind | 5 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 95 | 193.29 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 131 | 194.22 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 133 | 194.27 | humidity | 90 | 43200 | > th | dose dependent | sin | 16 | NA |
| 158 | 194.63 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 16 |
| 162 | 194.67 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 175 | 194.91 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 22 |
| 180 | 194.98 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 191 | 195.07 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 20 |
| 223 | 195.21 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 255 | 195.36 | radiation | 1 | 43200 | < th | dose dependent | sin | 15 | NA |
| 263 | 195.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 21 |
| 271 | 195.44 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 293 | 195.52 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 13 |
| 300 | 195.53 | humidity | 90 | 43200 | > th | dose dependent | rect. | 7 | 23 |
| 328 | 195.61 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 492 | 196.19 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 21 |
| 518 | 196.27 | wind | 7 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 529 | 196.30 | wind | 7 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 558 | 196.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 17 |
| 560 | 196.41 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 561 | 196.41 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 604 | 196.46 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 624 | 196.52 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 706 | 196.89 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 739 | 197.12 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 15 |
| 751 | 197.18 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 778 | 197.38 | radiation | 40 | 14400 | > th | dose dependent | rect. | 15 | 18 |
| 795 | 197.53 | humidity | 90 | 43200 | > th | dose independent | sin | 17 | NA |
| 829 | 197.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 831 | 197.77 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 12 |
| 832 | 197.77 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 20 |
| 836 | 197.78 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 18 |
| 844 | 197.82 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 15 |
| 850 | 197.85 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 12 |
| 887 | 198.03 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 891 | 198.04 | humidity | 90 | 43200 | < th | dose independent | sin | 17 | NA |
| 895 | 198.05 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 907 | 198.10 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 943 | 198.24 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 948 | 198.25 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 951 | 198.26 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 956 | 198.26 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 7 |
| 957 | 198.27 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 12 |
| 992 | 198.40 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 22 |
| 994 | 198.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 995 | 198.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 13 |
| 999 | 198.41 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 11 |