Os02g0570500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os02g0570500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.72 | 0.485 | 10.6 | -0.593 | 0.557 | -2.99 | -0.386 | -1.62 | 0.429 | 21.3 | 1.259 | 1520 | -- | -- |
| 104.04 | 0.475 | 10.6 | -0.709 | 0.83 | -3.09 | -0.491 | -- | 0.427 | 23.6 | 1.389 | 1609 | -- | -- |
| 105.14 | 0.478 | 10.6 | -0.668 | 0.723 | -3.02 | -- | -0.668 | 0.414 | 22.8 | 1.415 | 1579 | -- | -- |
| 104.92 | 0.477 | 10.6 | -0.739 | 0.877 | -3.12 | -- | -- | 0.406 | 23.7 | 1.362 | 1614 | -- | -- |
| 121.6 | 0.514 | 10.6 | -0.636 | -- | -2.47 | -- | -0.61 | 0.44 | -- | 1.253 | 1462 | -- | -- |
| 173.78 | 0.618 | 10.6 | -0.192 | 0.426 | -- | -0.305 | -- | 0.736 | 17.2 | -- | -- | -- | -- |
| 174 | 0.618 | 10.6 | -0.192 | 0.423 | -- | -- | -- | 0.735 | 17 | -- | -- | -- | -- |
| 122.37 | 0.515 | 10.6 | -0.722 | -- | -2.37 | -- | -- | 0.435 | -- | 1.346 | 1462 | -- | -- |
| 117.01 | 0.504 | 10.6 | -- | 0.827 | -2.79 | -- | -- | 0.502 | 23.8 | 1.822 | 1631 | -- | -- |
| 183.41 | 0.633 | 10.6 | -0.207 | -- | -- | -- | -- | 0.724 | -- | -- | -- | -- | -- |
| 174.96 | 0.619 | 10.6 | -- | 0.427 | -- | -- | -- | 0.756 | 17 | -- | -- | -- | -- |
| 133.8 | 0.539 | 10.6 | -- | -- | -2.08 | -- | -- | 0.52 | -- | 1.842 | 1505 | -- | -- |
| 184.54 | 0.634 | 10.5 | -- | -- | -- | -- | -- | 0.747 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.70 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 2 | 106.75 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 6 | 107.57 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 7 | 107.59 | radiation | 1 | 1440 | < th | dose dependent | sin | 23 | NA |
| 11 | 108.01 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 17 | 108.44 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 19 | 108.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 22 | 108.47 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 30 | 108.49 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 38 | 108.51 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 8 |
| 41 | 108.52 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 11 |
| 105 | 110.63 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 19 |
| 107 | 110.66 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 17 |
| 110 | 110.66 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 22 |
| 111 | 110.67 | radiation | 1 | 1440 | < th | dose dependent | rect. | 5 | 14 |
| 135 | 110.87 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 22 |
| 140 | 110.89 | radiation | 1 | 1440 | < th | dose dependent | rect. | 21 | 22 |
| 151 | 110.91 | radiation | 1 | 1440 | < th | dose dependent | no | NA | NA |
| 153 | 110.91 | radiation | 1 | 1440 | < th | dose dependent | rect. | 2 | 17 |
| 158 | 110.91 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 164 | 110.92 | radiation | 1 | 1440 | < th | dose dependent | rect. | 23 | 20 |
| 184 | 111.01 | radiation | 1 | 1440 | < th | dose independent | sin | 22 | NA |
| 185 | 111.03 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 190 | 111.23 | radiation | 1 | 1440 | > th | dose independent | sin | 22 | NA |
| 212 | 111.98 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 214 | 112.01 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 215 | 112.01 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 217 | 112.01 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 250 | 112.20 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 418 | 113.93 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 19 |
| 420 | 113.95 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 421 | 113.95 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 17 |
| 427 | 113.97 | radiation | 1 | 1440 | < th | dose independent | rect. | 5 | 22 |
| 433 | 113.99 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 443 | 114.02 | radiation | 1 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 448 | 114.02 | radiation | 1 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 460 | 114.03 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 23 |
| 461 | 114.04 | radiation | 1 | 1440 | < th | dose independent | no | NA | NA |
| 464 | 114.04 | radiation | 1 | 1440 | < th | dose independent | rect. | 23 | 20 |
| 489 | 114.30 | radiation | 1 | 1440 | > th | dose independent | rect. | 5 | 14 |
| 501 | 114.43 | radiation | 1 | 1440 | > th | dose independent | no | NA | NA |
| 592 | 114.99 | radiation | 1 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 621 | 115.53 | radiation | 1 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 715 | 118.01 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 719 | 118.33 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 769 | 119.58 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 770 | 119.58 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 833 | 121.37 | humidity | 90 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 949 | 123.22 | humidity | 90 | 720 | > th | dose dependent | sin | 17 | NA |