Os02g0569400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0569400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cytochrome P450 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 332.05 | 0.856 | 5.31 | 5.17 | 1.03 | -1.14 | 0.238 | 2.24 | 1.12 | 0.768 | 20.62 | 1309 | -- | -- |
| 343.28 | 0.863 | 5.36 | 4.95 | 1.04 | -1.46 | 0.659 | -- | 1.03 | 0.483 | 19.4 | 2360 | -- | -- |
| 332.2 | 0.849 | 5.31 | 5.16 | 1.04 | -1.13 | -- | 2.24 | 1.12 | 0.708 | 20.62 | 1264 | -- | -- |
| 342.64 | 0.862 | 5.37 | 4.93 | 1.06 | -1.63 | -- | -- | 1.05 | 0.599 | 19.37 | 2371 | -- | -- |
| 384.7 | 0.918 | 5.37 | 4.61 | -- | -1.08 | -- | 0.855 | 0.971 | -- | 20.62 | 1264 | -- | -- |
| 389.6 | 0.925 | 5.45 | 4.16 | 0.954 | -- | 0.533 | -- | 0.704 | 0.748 | -- | -- | -- | -- |
| 390.75 | 0.926 | 5.45 | 4.15 | 0.953 | -- | -- | -- | 0.702 | 0.609 | -- | -- | -- | -- |
| 388.76 | 0.922 | 5.38 | 4.45 | -- | -1.11 | -- | -- | 0.935 | -- | 20.6 | 1588 | -- | -- |
| 826.7 | 1.34 | 5.57 | -- | 1.02 | 1.1 | -- | -- | 0.198 | 0.256 | 18.3 | 208 | -- | -- |
| 447.62 | 0.989 | 5.43 | 4.18 | -- | -- | -- | -- | 0.719 | -- | -- | -- | -- | -- |
| 843.67 | 1.36 | 5.55 | -- | 1.02 | -- | -- | -- | 0.241 | 0.806 | -- | -- | -- | -- |
| 884.13 | 1.38 | 5.56 | -- | -- | 1.29 | -- | -- | 0.146 | -- | 18.46 | 1052 | -- | -- |
| 908.3 | 1.41 | 5.54 | -- | -- | -- | -- | -- | 0.255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 324.82 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 16 |
| 3 | 325.31 | humidity | 70 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 42 | 329.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 54 | 329.65 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 66 | 329.91 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 101 | 330.44 | temperature | 15 | 90 | > th | dose dependent | sin | 4 | NA |
| 114 | 330.64 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 225 | 331.88 | temperature | 15 | 90 | > th | dose dependent | rect. | 5 | 23 |
| 248 | 332.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 11 |
| 268 | 332.32 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 3 |
| 277 | 332.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 291 | 332.49 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 307 | 332.65 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 324 | 332.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 328 | 332.76 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 3 |
| 420 | 333.38 | temperature | 20 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 429 | 333.44 | humidity | 80 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 446 | 333.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 17 |
| 523 | 334.01 | temperature | 20 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 529 | 334.03 | temperature | 20 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 543 | 334.10 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 552 | 334.16 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 579 | 334.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 8 | 23 |
| 582 | 334.35 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 583 | 334.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 590 | 334.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 10 | 23 |
| 598 | 334.42 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 616 | 334.55 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 642 | 334.64 | humidity | 80 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 658 | 334.76 | temperature | 30 | 10 | < th | dose dependent | rect. | 4 | 14 |
| 659 | 334.76 | temperature | 30 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 673 | 334.84 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 723 | 335.10 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 769 | 335.30 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 775 | 335.37 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 826 | 335.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 904 | 336.03 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 907 | 336.04 | temperature | 20 | 270 | > th | dose independent | rect. | 22 | 20 |
| 909 | 336.05 | radiation | 20 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 912 | 336.06 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 915 | 336.08 | wind | 5 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 921 | 336.13 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 961 | 336.36 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 979 | 336.42 | humidity | 90 | 4320 | < th | dose independent | rect. | 9 | 18 |
| 983 | 336.46 | temperature | 30 | 30 | < th | dose dependent | sin | 2 | NA |
| 997 | 336.53 | wind | 5 | 4320 | > th | dose independent | rect. | 24 | 1 |