Os02g0567200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein phosphatase 2C-like domain containing protein.
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Os02g0567200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein phosphatase 2C-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.2 | 0.379 | 8.86 | 0.629 | 1.45 | 1.04 | -0.442 | -2.95 | -0.137 | 7.11 | 25.14 | 1243 | -- | -- |
| 67.76 | 0.383 | 8.79 | 1.37 | 1.5 | 0.824 | -0.32 | -- | -0.016 | 7.17 | 22.8 | 1110 | -- | -- |
| 65.59 | 0.377 | 8.86 | 0.658 | 1.47 | 1.06 | -- | -2.9 | -0.132 | 7.17 | 25.04 | 1189 | -- | -- |
| 67.98 | 0.384 | 8.78 | 1.36 | 1.49 | 0.817 | -- | -- | -0.0019 | 7.2 | 23.5 | 1116 | -- | -- |
| 173.3 | 0.613 | 8.89 | 0.743 | -- | 1.01 | -- | -2.19 | -0.143 | -- | 24 | 1331 | -- | -- |
| 87.7 | 0.439 | 8.75 | 1.61 | 1.46 | -- | -0.371 | -- | 0.132 | 6.75 | -- | -- | -- | -- |
| 88.05 | 0.439 | 8.75 | 1.61 | 1.46 | -- | -- | -- | 0.133 | 6.74 | -- | -- | -- | -- |
| 175.23 | 0.617 | 8.83 | 1.31 | -- | 0.854 | -- | -- | -0.0323 | -- | 23.43 | 1326 | -- | -- |
| 72.58 | 0.397 | 8.9 | -- | 1.47 | 1.47 | -- | -- | -0.51 | 6.85 | 15.09 | 40080 | -- | -- |
| 199.13 | 0.659 | 8.78 | 1.64 | -- | -- | -- | -- | 0.161 | -- | -- | -- | -- | -- |
| 155.96 | 0.584 | 8.79 | -- | 1.48 | -- | -- | -- | -0.0461 | 6.68 | -- | -- | -- | -- |
| 183.44 | 0.631 | 8.93 | -- | -- | 1.46 | -- | -- | -0.477 | -- | 14.2 | 47520 | -- | -- |
| 269.93 | 0.767 | 8.82 | -- | -- | -- | -- | -- | -0.0204 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.96 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 3 | 65.22 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 10 | 65.78 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 12 | 65.82 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 18 | 65.93 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 59 | 66.36 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 65 | 66.40 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 106 | 66.72 | temperature | 25.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 114 | 66.79 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 11 |
| 126 | 66.88 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 11 | 8 |
| 128 | 66.89 | wind | 9.0 | 43200 | > th | dose independent | rect. | 11 | 13 |
| 147 | 67.04 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 150 | 67.05 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 156 | 67.09 | wind | 9.0 | 43200 | < th | dose independent | rect. | 11 | 13 |
| 161 | 67.11 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 16 |
| 204 | 67.35 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 13 | 17 |
| 207 | 67.38 | wind | 9.0 | 43200 | > th | dose independent | rect. | 13 | 10 |
| 225 | 67.44 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 238 | 67.47 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 242 | 67.48 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 278 | 67.56 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 8 |
| 288 | 67.57 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 293 | 67.57 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 298 | 67.59 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 299 | 67.59 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 8 |
| 312 | 67.62 | wind | 9.0 | 43200 | < th | dose independent | rect. | 13 | 10 |
| 327 | 67.65 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 350 | 67.70 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 14 | 10 |
| 368 | 67.74 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 6 |
| 376 | 67.76 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 8 | 6 |
| 397 | 67.78 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 11 | 20 |
| 417 | 67.83 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 8 | 6 |
| 419 | 67.83 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 6 |
| 420 | 67.83 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 10 |
| 455 | 67.92 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 503 | 68.00 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 544 | 68.09 | wind | 9.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 568 | 68.15 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 571 | 68.16 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 21 | 2 |
| 573 | 68.16 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 577 | 68.17 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 578 | 68.17 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 603 | 68.24 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 636 | 68.30 | wind | 7.0 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 665 | 68.37 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 667 | 68.37 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 683 | 68.41 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 687 | 68.41 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 709 | 68.46 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 733 | 68.50 | wind | 7.0 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 752 | 68.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 11 |
| 790 | 68.57 | wind | 7.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 805 | 68.59 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 841 | 68.65 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 875 | 68.70 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 896 | 68.72 | temperature | 25.0 | 720 | < th | dose independent | rect. | 8 | 17 |
| 906 | 68.73 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 5 |
| 937 | 68.75 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 949 | 68.77 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 965 | 68.79 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 8 | 20 |
| 976 | 68.81 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 980 | 68.81 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 2 | NA |