Os02g0567000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0567000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.91 | 0.27 | 10.3 | 0.277 | 0.308 | 0.905 | -0.438 | 1.02 | 0.153 | 6.85 | 30 | 10 | -- | -- |
| 34.26 | 0.275 | 10.3 | 0.452 | 0.312 | 0.935 | -0.437 | -- | 0.203 | 7.24 | 30.1 | 10 | -- | -- |
| 33.34 | 0.271 | 10.3 | 0.268 | 0.31 | 0.903 | -- | 1 | 0.153 | 6.99 | 30 | 10 | -- | -- |
| 34.74 | 0.276 | 10.3 | 0.434 | 0.317 | 0.899 | -- | -- | 0.196 | 6.89 | 30.1 | 10 | -- | -- |
| 36.25 | 0.28 | 10.3 | 0.312 | -- | 1.08 | -- | 1.08 | 0.18 | -- | 30.46 | 153 | -- | -- |
| 45.65 | 0.317 | 10.3 | 0.224 | 0.506 | -- | 0.0911 | -- | 0.0244 | 4.55 | -- | -- | -- | -- |
| 45.67 | 0.316 | 10.3 | 0.224 | 0.507 | -- | -- | -- | 0.024 | 4.59 | -- | -- | -- | -- |
| 37.48 | 0.285 | 10.3 | 0.491 | -- | 1.12 | -- | -- | 0.218 | -- | 31.82 | 150 | -- | -- |
| 39.22 | 0.293 | 10.3 | -- | 0.347 | 0.72 | -- | -- | 0.118 | 6.19 | 30.1 | 10 | -- | -- |
| 59.34 | 0.36 | 10.3 | 0.243 | -- | -- | -- | -- | 0.0373 | -- | -- | -- | -- | -- |
| 46.99 | 0.321 | 10.3 | -- | 0.511 | -- | -- | -- | -0.000939 | 4.58 | -- | -- | -- | -- |
| 43.35 | 0.307 | 10.3 | -- | -- | 0.983 | -- | -- | 0.135 | -- | 32.43 | 149 | -- | -- |
| 60.9 | 0.364 | 10.3 | -- | -- | -- | -- | -- | 0.0103 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.40 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 2 | 32.50 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 3 | 32.61 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 5 | 32.70 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 8 | 32.80 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 11 | 32.86 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 14 | 32.88 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 17 | 32.91 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 18 | 32.92 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 22 | 32.96 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 28 | 33.08 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 30 | 33.09 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 42 | 33.22 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 50 | 33.28 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 68 | 33.47 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 77 | 33.59 | temperature | 15.0 | 10 | > th | dose dependent | no | NA | NA |
| 94 | 33.82 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 102 | 33.87 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 136 | 34.11 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 192 | 34.31 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 197 | 34.32 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 222 | 34.39 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 10 |
| 235 | 34.41 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 251 | 34.45 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 302 | 34.49 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 322 | 34.52 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 364 | 34.58 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 366 | 34.58 | temperature | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 381 | 34.62 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 395 | 34.62 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 445 | 34.66 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 447 | 34.66 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 7 | 17 |
| 461 | 34.69 | temperature | 10.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 467 | 34.70 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 487 | 34.73 | temperature | 25.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 491 | 34.74 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 535 | 34.82 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 621 | 34.96 | temperature | 30.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 678 | 35.05 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 682 | 35.06 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 715 | 35.10 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 724 | 35.11 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 726 | 35.12 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 23 |
| 733 | 35.14 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 747 | 35.16 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 18 |
| 777 | 35.20 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 787 | 35.22 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 876 | 35.35 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 891 | 35.38 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 932 | 35.43 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 15 | 12 |