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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0565500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Pto kinase interactor 1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.2 (0.0187) R2 : 0.00102
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0268 (0.0393) R2dN8 : 0.00131 R2N8 : 0.00102
σ : 0.351
deviance : 56.65
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.18 0.346 3.1 0.955 0.0543 -0.623 -0.339 4.67 0.0446 3.57 28.79 1542 -- --
55.16 0.346 3.19 0.133 0.0851 -0.166 -0.297 -- 0.0135 4.39 17.91 2311 -- --
54.47 0.344 3.1 0.949 0.057 -0.628 -- 4.82 0.0488 3.54 28.74 1653 -- --
55.35 0.347 3.19 0.139 0.0963 -0.163 -- -- 0.0254 5.66 18.05 2537 -- --
54.43 0.344 3.1 0.953 -- -0.67 -- 5.16 0.0576 -- 28.77 1744 -- --
55.92 0.351 3.2 0.0715 0.0767 -- -0.315 -- -0.0219 4.33 -- -- -- --
56.02 0.35 3.2 0.075 0.0952 -- -- -- -0.0201 6.6 -- -- -- --
55.74 0.348 3.19 0.143 -- -0.176 -- -- 0.02 -- 18 2091 -- --
55.78 0.348 3.2 -- 0.103 -0.108 -- -- -0.00674 5.69 21.05 2585 -- --
56.49 0.351 3.2 0.0773 -- -- -- -- -0.0182 -- -- -- -- --
56.16 0.351 3.2 -- 0.0962 -- -- -- -0.0285 6.55 -- -- -- --
56.19 0.349 3.2 -- -- -0.118 -- -- -0.00553 -- 21.13 2000 -- --
56.65 0.351 3.2 -- -- -- -- -- -0.0268 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.46 atmosphere 1000.0 90 > th dose independent rect. 3 23
2 51.50 wind 3.0 90 < th dose dependent rect. 2 1
4 51.68 atmosphere 1000.0 10 > th dose independent rect. 21 23
7 51.83 atmosphere 1005.0 90 > th dose independent rect. 2 1
9 51.83 atmosphere 1000.0 90 > th dose dependent rect. 2 1
11 51.85 atmosphere 1005.0 10 > th dose dependent rect. 2 2
12 51.96 wind 3.0 90 < th dose independent rect. 2 1
18 52.29 radiation 1.0 43200 < th dose dependent rect. 3 1
21 52.36 temperature 15.0 90 > th dose dependent rect. 2 1
23 52.44 radiation 1.0 4320 < th dose dependent rect. 3 1
29 52.55 atmosphere 1005.0 10 > th dose independent rect. 2 2
36 52.61 temperature 10.0 90 > th dose independent rect. 2 1
38 52.61 temperature 30.0 90 < th dose independent rect. 2 1
39 52.61 humidity 50.0 90 > th dose independent rect. 2 1
42 52.61 atmosphere 995.0 90 > th dose independent rect. 2 1
43 52.61 atmosphere 1010.0 90 < th dose independent rect. 2 1
45 52.61 radiation 1.0 90 < th dose independent rect. 2 1
50 52.61 precipitation 0.1 90 < th dose independent rect. 2 1
51 52.61 temperature 10.0 90 > th dose independent rect. 3 23
52 52.61 precipitation 0.1 90 < th dose independent rect. 3 23
53 52.61 radiation 1.0 90 < th dose dependent rect. 2 1
58 52.61 precipitation 0.1 90 < th dose dependent rect. 2 1
59 52.61 precipitation 0.1 90 < th dose dependent rect. 3 23
75 52.67 wind 9.0 1440 < th dose independent rect. 3 1
76 52.67 temperature 10.0 1440 > th dose independent rect. 3 1
79 52.67 temperature 30.0 1440 < th dose independent rect. 3 1
83 52.67 humidity 50.0 1440 > th dose independent rect. 3 1
92 52.67 atmosphere 995.0 1440 > th dose independent rect. 3 1
93 52.67 radiation 1.0 1440 < th dose independent rect. 3 1
113 52.67 temperature 10.0 1440 > th dose independent rect. 4 23
121 52.69 temperature 25.0 90 > th dose independent rect. 2 1
142 52.79 humidity 90.0 30 > th dose independent rect. 2 1
161 52.80 humidity 50.0 30 > th dose dependent rect. 2 1
175 52.82 atmosphere 1000.0 90 > th dose independent rect. 3 16
178 52.84 atmosphere 1015.0 30 < th dose dependent rect. 2 1
181 52.87 temperature 30.0 30 < th dose dependent rect. 2 1
182 52.88 atmosphere 1000.0 10 > th dose independent rect. 4 16
185 52.89 temperature 20.0 10 > th dose independent rect. 20 1
186 52.90 wind 1.0 30 > th dose independent rect. 2 1
190 52.90 temperature 30.0 30 < th dose dependent rect. 20 1
191 52.90 humidity 90.0 10 < th dose dependent rect. 20 1
193 52.91 wind 7.0 10 < th dose independent rect. 20 1
197 52.91 atmosphere 1015.0 10 < th dose dependent rect. 20 1
200 52.92 wind 1.0 10 > th dose independent rect. 20 1
203 52.92 temperature 10.0 10 > th dose independent rect. 20 1
205 52.92 temperature 30.0 10 < th dose independent rect. 20 1
206 52.92 humidity 50.0 10 > th dose independent rect. 20 1
209 52.92 atmosphere 995.0 10 > th dose independent rect. 20 1
212 52.92 atmosphere 1010.0 10 < th dose independent rect. 20 1
214 52.92 radiation 1.0 10 < th dose independent rect. 20 1
219 52.92 precipitation 0.1 10 < th dose independent rect. 20 1
220 52.92 temperature 10.0 10 > th dose independent rect. 21 23
222 52.92 wind 9.0 10 < th dose dependent rect. 20 1
224 52.92 radiation 1.0 10 < th dose dependent rect. 20 1
229 52.92 precipitation 0.1 10 < th dose dependent rect. 20 1
231 52.93 wind 9.0 90 < th dose independent rect. 3 23
238 52.94 atmosphere 995.0 10 > th dose dependent rect. 20 1
240 52.95 radiation 10.0 30 < th dose independent rect. 21 23
245 52.96 humidity 90.0 10 < th dose independent rect. 20 1
246 52.96 humidity 50.0 10 > th dose dependent rect. 20 1
249 52.96 radiation 1.0 1440 < th dose dependent rect. 21 1
250 52.97 temperature 10.0 10 > th dose dependent rect. 20 1
280 52.99 precipitation 0.1 30 < th dose independent rect. 21 23
281 52.99 wind 1.0 10 > th dose dependent rect. 20 1
292 52.99 temperature 25.0 30 > th dose dependent rect. 20 2
293 52.99 precipitation 0.1 30 < th dose dependent rect. 21 23
300 53.00 humidity 80.0 30 > th dose dependent rect. 20 1
335 53.03 temperature 10.0 1440 > th dose independent rect. 21 1
338 53.03 temperature 30.0 1440 < th dose independent rect. 21 1
344 53.03 humidity 50.0 1440 > th dose independent rect. 21 1
350 53.03 atmosphere 995.0 1440 > th dose independent rect. 21 1
351 53.03 radiation 1.0 1440 < th dose independent rect. 21 1
371 53.03 temperature 10.0 1440 > th dose independent rect. 22 23
399 53.07 wind 9.0 30 < th dose independent rect. 21 23
406 53.10 radiation 10.0 30 < th dose independent rect. 3 23
420 53.14 temperature 10.0 30 > th dose dependent rect. 21 23
428 53.19 precipitation 0.1 4320 > th dose dependent rect. 20 1
447 53.27 precipitation 0.1 1440 < th dose independent rect. 21 1
450 53.27 precipitation 0.1 1440 < th dose dependent rect. 21 1
460 53.29 temperature 10.0 30 > th dose dependent rect. 3 23
464 53.33 atmosphere 1000.0 10 > th dose independent rect. 2 14
466 53.35 humidity 90.0 90 < th dose independent rect. 2 1
468 53.35 atmosphere 1000.0 10 > th dose independent rect. 2 12
479 53.43 radiation 20.0 30 < th dose dependent rect. 21 23
485 53.45 temperature 25.0 720 > th dose dependent rect. 3 5
488 53.49 atmosphere 995.0 4320 > th dose independent rect. 12 5
495 53.52 atmosphere 995.0 4320 > th dose independent rect. 12 3
496 53.52 wind 7.0 10 < th dose dependent rect. 20 8
497 53.53 atmosphere 995.0 4320 > th dose independent rect. 14 1
499 53.53 atmosphere 1000.0 10 > th dose independent rect. 10 10
501 53.53 temperature 10.0 10 > th dose dependent rect. 4 16
502 53.54 atmosphere 995.0 4320 > th dose independent rect. 8 9
544 53.58 atmosphere 995.0 4320 > th dose independent rect. 8 7
546 53.58 atmosphere 995.0 4320 < th dose dependent rect. 3 12
548 53.59 wind 5.0 10 < th dose independent rect. 19 9
552 53.59 radiation 20.0 30 < th dose dependent rect. 3 23
563 53.61 precipitation 0.1 4320 > th dose independent rect. 20 1
568 53.61 humidity 80.0 14400 < th dose dependent rect. 24 9
576 53.63 atmosphere 995.0 4320 < th dose independent rect. 15 1
624 53.64 atmosphere 995.0 4320 < th dose dependent rect. 15 1
669 53.68 atmosphere 1000.0 10 > th dose independent rect. 24 20
670 53.68 humidity 50.0 30 > th dose independent rect. 21 23
674 53.68 atmosphere 995.0 4320 < th dose dependent rect. 1 15
711 53.71 radiation 1.0 4320 < th dose dependent rect. 22 5
752 53.72 humidity 50.0 720 > th dose independent rect. 23 16
791 53.74 humidity 90.0 720 < th dose independent rect. 2 2
793 53.74 temperature 25.0 720 > th dose independent rect. 3 5
795 53.74 temperature 20.0 30 > th dose independent rect. 21 10
805 53.75 humidity 50.0 30 > th dose independent rect. 3 23
815 53.76 atmosphere 1000.0 720 > th dose independent rect. 3 8
821 53.76 atmosphere 995.0 4320 < th dose independent rect. 22 17
825 53.76 wind 1.0 10 > th dose independent rect. 21 23
830 53.77 atmosphere 995.0 4320 < th dose independent rect. 24 15
831 53.77 temperature 20.0 90 > th dose independent rect. 3 16
835 53.78 humidity 70.0 720 > th dose independent rect. 19 7
836 53.78 atmosphere 995.0 4320 < th dose independent rect. 2 13
838 53.78 temperature 25.0 10 > th dose independent rect. 24 20
843 53.79 atmosphere 1015.0 30 < th dose independent rect. 19 9
881 53.80 radiation 40.0 10 < th dose dependent rect. 14 12
893 53.82 precipitation 0.1 720 < th dose independent rect. 15 8
899 53.82 precipitation 0.1 720 < th dose dependent rect. 15 8
903 53.83 wind 7.0 720 < th dose independent rect. 16 13
906 53.83 temperature 15.0 30 > th dose dependent rect. 3 4
907 53.83 atmosphere 995.0 30 > th dose dependent rect. 4 15
909 53.84 temperature 20.0 30 > th dose independent rect. 23 8
910 53.84 atmosphere 995.0 4320 > th dose independent rect. 12 9
911 53.84 atmosphere 1000.0 720 > th dose independent rect. 21 18
914 53.84 radiation 1.0 90 < th dose dependent rect. 5 23
927 53.87 wind 5.0 14400 < th dose dependent rect. 10 1
929 53.87 temperature 25.0 720 > th dose dependent rect. 24 9
933 53.88 humidity 60.0 1440 < th dose independent rect. 18 1
935 53.88 humidity 60.0 1440 < th dose dependent rect. 18 1
990 53.89 atmosphere 1010.0 30 < th dose independent rect. 21 23