Os02g0562400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os02g0562400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.5 | 0.223 | 10.6 | 0.544 | 0.406 | 0.457 | 0.00291 | 0.101 | 0.214 | 3.31 | 29.27 | 3935 | -- | -- |
| 22.51 | 0.221 | 10.6 | 0.556 | 0.402 | 0.466 | -0.0107 | -- | 0.215 | 3.34 | 29.2 | 3926 | -- | -- |
| 22.5 | 0.221 | 10.6 | 0.541 | 0.407 | 0.457 | -- | 0.116 | 0.214 | 3.3 | 29.26 | 3924 | -- | -- |
| 22.49 | 0.221 | 10.6 | 0.567 | 0.41 | 0.465 | -- | -- | 0.229 | 3.31 | 28.9 | 3928 | -- | -- |
| 29.76 | 0.254 | 10.6 | 0.643 | -- | 0.461 | -- | -0.189 | 0.274 | -- | 27.99 | 4805 | -- | -- |
| 29.18 | 0.253 | 10.6 | 0.44 | 0.373 | -- | -0.121 | -- | 0.213 | 3.75 | -- | -- | -- | -- |
| 29.22 | 0.253 | 10.6 | 0.442 | 0.371 | -- | -- | -- | 0.214 | 3.68 | -- | -- | -- | -- |
| 29.77 | 0.254 | 10.6 | 0.611 | -- | 0.457 | -- | -- | 0.268 | -- | 27.8 | 4800 | -- | -- |
| 30.45 | 0.257 | 10.6 | -- | 0.406 | 0.348 | -- | -- | 0.158 | 3.41 | 29.2 | 3926 | -- | -- |
| 36.87 | 0.284 | 10.6 | 0.457 | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
| 34.36 | 0.274 | 10.6 | -- | 0.38 | -- | -- | -- | 0.165 | 3.67 | -- | -- | -- | -- |
| 38.41 | 0.29 | 10.6 | -- | -- | 0.233 | -- | -- | 0.182 | -- | 28.8 | 4803 | -- | -- |
| 42.38 | 0.304 | 10.6 | -- | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.29 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 2 | 21.29 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 10 | 21.59 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 57 | 21.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 62 | 21.98 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 8 |
| 65 | 21.98 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 8 |
| 70 | 22.00 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 72 | 22.00 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 12 |
| 73 | 22.01 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 82 | 22.04 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 10 |
| 111 | 22.13 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 115 | 22.16 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 117 | 22.16 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 128 | 22.19 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 8 |
| 175 | 22.26 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 3 |
| 193 | 22.29 | humidity | 80.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 199 | 22.30 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 14 | 19 |
| 212 | 22.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 232 | 22.34 | radiation | 30.0 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 233 | 22.35 | humidity | 80.0 | 14400 | < th | dose independent | sin | 19 | NA |
| 234 | 22.35 | radiation | 30.0 | 4320 | < th | dose independent | sin | 12 | NA |
| 240 | 22.35 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 268 | 22.38 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 278 | 22.39 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 281 | 22.40 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 285 | 22.41 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 298 | 22.42 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 301 | 22.42 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 8 |
| 304 | 22.43 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 321 | 22.44 | humidity | 70.0 | 14400 | > th | dose dependent | sin | 17 | NA |
| 365 | 22.47 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 411 | 22.49 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 8 |
| 442 | 22.50 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 13 |
| 450 | 22.51 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 488 | 22.53 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 489 | 22.53 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 491 | 22.53 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 10 |
| 492 | 22.53 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 499 | 22.53 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 523 | 22.54 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 534 | 22.55 | wind | 5.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 535 | 22.55 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 5 |
| 545 | 22.55 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 558 | 22.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 9 |
| 561 | 22.55 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 10 |
| 564 | 22.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 601 | 22.57 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 619 | 22.58 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 2 | NA |
| 632 | 22.58 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 16 |
| 640 | 22.59 | wind | 1.0 | 43200 | > th | dose dependent | sin | 6 | NA |
| 660 | 22.60 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 16 |
| 695 | 22.61 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 705 | 22.61 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 24 | 10 |
| 709 | 22.61 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 10 |
| 720 | 22.62 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 726 | 22.62 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 728 | 22.62 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 748 | 22.62 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 755 | 22.63 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 757 | 22.63 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 820 | 22.64 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 822 | 22.65 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 824 | 22.65 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 836 | 22.65 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 841 | 22.65 | wind | 9.0 | 43200 | < th | dose dependent | sin | 6 | NA |
| 874 | 22.66 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 906 | 22.67 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 19 | 15 |
| 915 | 22.67 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 926 | 22.67 | radiation | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 938 | 22.68 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 951 | 22.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 19 |