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Os02g0558500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.66 (0.0127) R2 : 0.834
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.29 (0.0302) R2dC : 0.671 R2C : 0.628
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.557 (0.0267) R2dN8 : 0.205 R2N8 : 0.163
σ : 0.239
deviance : 26.17
__
_____
C
peak time of C : 11.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.96 0.22 9.67 0.165 0.843 -0.389 0.0223 -0.0399 -0.546 11.3 0.6031 37 -- --
21.96 0.218 9.67 0.165 0.84 -0.39 0.0476 -- -0.548 11.3 0.5496 36 -- --
21.96 0.218 9.67 0.168 0.842 -0.39 -- -0.0533 -0.545 11.3 0.57 36 -- --
21.98 0.218 9.67 0.164 0.84 -0.391 -- -- -0.546 11.3 0.5481 36 -- --
33.39 0.269 9.74 0.236 -- -0.938 -- 0.13 -0.681 -- 1.55 41 -- --
25.18 0.235 9.66 0.188 1.3 -- 0.0713 -- -0.536 11.5 -- -- -- --
25.21 0.235 9.66 0.191 1.3 -- -- -- -0.536 11.5 -- -- -- --
31.61 0.262 9.68 0.165 -- -0.978 -- -- -0.543 -- 0.7903 61 -- --
22.71 0.222 9.67 -- 0.841 -0.393 -- -- -0.55 11.3 0.55 36 -- --
130.69 0.534 9.69 0.156 -- -- -- -- -0.55 -- -- -- -- --
26.17 0.239 9.66 -- 1.29 -- -- -- -0.557 11.5 -- -- -- --
32.34 0.265 9.68 -- -- -0.981 -- -- -0.545 -- 0.79 61 -- --
131.33 0.535 9.69 -- -- -- -- -- -0.567 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.14 radiation 1.0 90 < th dose independent rect. 6 15
2 21.14 radiation 1.0 90 < th dose dependent rect. 6 15
6 21.25 radiation 1.0 90 < th dose dependent rect. 11 10
11 21.29 radiation 1.0 90 < th dose independent rect. 11 10
12 21.29 radiation 1.0 90 < th dose independent rect. 9 12
25 21.58 humidity 50.0 30 > th dose dependent rect. 8 13
33 21.64 radiation 1.0 30 < th dose dependent rect. 1 21
35 21.66 radiation 1.0 30 < th dose dependent sin 22 NA
48 21.73 radiation 1.0 90 > th dose independent sin 22 NA
63 21.77 radiation 10.0 90 < th dose dependent rect. 5 23
67 21.79 radiation 1.0 90 < th dose independent sin 22 NA
72 21.82 radiation 1.0 30 < th dose independent rect. 1 21
73 21.82 radiation 1.0 90 < th dose independent rect. 23 23
91 21.85 radiation 1.0 90 < th dose independent rect. 5 23
97 21.87 radiation 1.0 30 < th dose dependent rect. 23 23
105 21.91 radiation 1.0 90 > th dose independent rect. 7 23
110 21.92 radiation 1.0 30 < th dose dependent rect. 1 23
157 22.05 temperature 15.0 270 > th dose independent rect. 7 13
168 22.07 radiation 1.0 30 < th dose dependent no NA NA
176 22.07 radiation 1.0 30 < th dose dependent rect. 11 21
182 22.07 radiation 1.0 30 < th dose dependent rect. 13 23
183 22.07 radiation 1.0 30 < th dose dependent rect. 15 23
187 22.08 radiation 1.0 30 < th dose dependent rect. 13 19
196 22.08 radiation 1.0 30 < th dose dependent rect. 17 23
214 22.10 radiation 1.0 30 < th dose dependent rect. 11 18
220 22.11 radiation 1.0 30 < th dose independent rect. 1 23
224 22.11 radiation 1.0 30 < th dose dependent rect. 13 16
240 22.13 precipitation 0.1 90 < th dose independent rect. 21 21
242 22.13 precipitation 0.1 90 < th dose dependent rect. 21 21
249 22.14 humidity 50.0 90 > th dose dependent rect. 17 4
260 22.15 humidity 80.0 10 > th dose independent rect. 8 13
263 22.15 radiation 1.0 30 < th dose dependent rect. 15 21
268 22.16 radiation 1.0 90 > th dose independent rect. 4 14
281 22.16 radiation 1.0 30 < th dose dependent rect. 15 17
292 22.17 precipitation 0.1 270 < th dose independent rect. 20 11
297 22.17 precipitation 0.1 270 < th dose dependent rect. 20 11
308 22.18 humidity 90.0 30 < th dose dependent rect. 22 20
322 22.20 radiation 1.0 30 < th dose dependent rect. 15 14
328 22.21 wind 9.0 270 < th dose independent rect. 7 13
333 22.22 temperature 10.0 270 > th dose independent rect. 20 11
334 22.22 temperature 30.0 270 < th dose independent rect. 20 11
335 22.22 humidity 50.0 270 > th dose independent rect. 20 11
337 22.22 atmosphere 995.0 270 > th dose independent rect. 20 11
338 22.22 radiation 40.0 270 < th dose independent rect. 20 11
340 22.22 atmosphere 1015.0 270 < th dose independent rect. 7 13
347 22.23 wind 9.0 270 < th dose independent rect. 20 11
359 22.24 humidity 90.0 30 < th dose dependent rect. 5 13
392 22.27 radiation 1.0 30 < th dose independent no NA NA
393 22.27 radiation 1.0 30 < th dose independent rect. 11 21
399 22.27 radiation 1.0 30 < th dose independent rect. 13 23
400 22.27 radiation 1.0 30 < th dose independent rect. 15 23
401 22.27 radiation 1.0 30 < th dose independent rect. 17 23
409 22.28 radiation 1.0 30 > th dose independent no NA NA
431 22.28 radiation 1.0 30 < th dose independent rect. 13 19
473 22.28 humidity 50.0 90 > th dose dependent rect. 11 10
477 22.29 precipitation 0.1 720 < th dose independent rect. 3 5
478 22.29 precipitation 0.1 720 < th dose dependent rect. 3 5
486 22.30 humidity 90.0 30 < th dose dependent rect. 24 18
534 22.33 temperature 10.0 720 > th dose dependent rect. 1 2
546 22.34 radiation 1.0 30 < th dose independent rect. 11 18
558 22.35 radiation 30.0 270 < th dose independent rect. 15 12
559 22.35 radiation 1.0 30 < th dose independent rect. 13 16
566 22.35 radiation 40.0 270 < th dose dependent rect. 20 11
572 22.36 radiation 1.0 30 < th dose independent rect. 15 21
588 22.37 radiation 1.0 30 < th dose independent rect. 15 17
690 22.41 temperature 30.0 90 < th dose independent rect. 17 4
704 22.41 atmosphere 1015.0 90 < th dose dependent rect. 18 3
713 22.42 wind 9.0 90 < th dose independent rect. 18 3
714 22.42 temperature 10.0 90 > th dose independent rect. 18 3
716 22.42 humidity 50.0 90 > th dose independent rect. 18 3
717 22.42 atmosphere 1010.0 90 < th dose independent rect. 18 3
724 22.42 temperature 10.0 90 > th dose independent rect. 21 21
735 22.43 atmosphere 995.0 90 > th dose independent rect. 18 3
736 22.43 humidity 50.0 720 > th dose independent rect. 1 10
737 22.43 atmosphere 1015.0 720 < th dose independent rect. 1 10
739 22.43 wind 9.0 720 < th dose independent rect. 23 14
754 22.43 humidity 50.0 90 > th dose dependent rect. 1 20
773 22.44 radiation 1.0 90 > th dose independent rect. 9 23
786 22.45 wind 9.0 720 < th dose independent rect. 1 10
788 22.45 humidity 80.0 30 < th dose independent rect. 7 11
819 22.47 humidity 50.0 90 > th dose independent rect. 8 13
821 22.47 humidity 50.0 720 > th dose independent rect. 23 14
822 22.47 precipitation 0.1 720 < th dose independent rect. 3 14
841 22.47 precipitation 0.1 720 < th dose dependent rect. 3 14
845 22.48 wind 1.0 90 > th dose independent rect. 18 3
871 22.49 wind 7.0 720 < th dose independent rect. 8 3
872 22.49 wind 1.0 270 > th dose independent rect. 7 13
882 22.49 wind 9.0 90 < th dose independent rect. 21 21
895 22.50 temperature 10.0 720 > th dose independent rect. 1 10
896 22.50 atmosphere 995.0 720 > th dose independent rect. 1 10
897 22.50 temperature 10.0 720 > th dose independent rect. 11 14
898 22.50 humidity 80.0 10 < th dose independent rect. 4 14
905 22.50 precipitation 0.1 270 < th dose independent rect. 19 22
916 22.50 precipitation 0.1 270 < th dose dependent rect. 19 22
920 22.51 humidity 80.0 30 < th dose independent rect. 13 5
934 22.51 wind 9.0 90 < th dose dependent rect. 18 3
956 22.53 temperature 10.0 720 > th dose independent rect. 13 10
957 22.53 temperature 10.0 720 > th dose independent rect. 23 14
958 22.53 atmosphere 995.0 720 > th dose independent rect. 23 14
977 22.54 wind 9.0 720 < th dose independent rect. 3 5
978 22.54 temperature 10.0 720 > th dose independent rect. 3 5
979 22.54 temperature 30.0 720 < th dose independent rect. 3 5
980 22.54 humidity 50.0 720 > th dose independent rect. 3 5
982 22.54 atmosphere 995.0 720 > th dose independent rect. 3 5
987 22.54 temperature 10.0 720 > th dose independent rect. 8 19