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Os02g0557700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Glucose/ribitol dehydrogenase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.8 (0.0158) R2 : 0.797
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.69 (0.04) R2dC : 0.793 R2C : 0.795
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0719 (0.0334) R2dN8 : 0.00267 R2N8 : 0.0039
σ : 0.299
deviance : 40.84
__
_____
C
peak time of C : 15.5
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.73 0.26 13.8 -0.406 1.45 0.322 -0.113 -0.031 -0.185 15.5 89.7 121 -- --
30.73 0.258 13.8 -0.403 1.45 0.322 -0.134 -- -0.185 15.5 89.66 121 -- --
30.75 0.258 13.8 -0.412 1.45 0.318 -- -0.0772 -0.186 15.5 89.78 121 -- --
30.79 0.258 13.8 -0.406 1.45 0.317 -- -- -0.185 15.5 89.68 121 -- --
94.08 0.452 13.8 -0.461 -- 1 -- 0.0715 -0.157 -- 82.99 129 -- --
35.6 0.28 13.8 -0.446 1.68 -- 0.0547 -- -0.122 15.5 -- -- -- --
35.61 0.279 13.8 -0.445 1.68 -- -- -- -0.122 15.5 -- -- -- --
93.66 0.451 13.8 -0.455 -- 0.994 -- -- -0.172 -- 82.7 113 -- --
35.05 0.276 13.8 -- 1.44 0.348 -- -- -0.146 15.5 89.18 130 -- --
193.43 0.65 13.8 -0.516 -- -- -- -- -0.166 -- -- -- -- --
40.84 0.299 13.8 -- 1.69 -- -- -- -0.0719 15.5 -- -- -- --
99.1 0.464 13.8 -- -- 1 -- -- -0.121 -- 82.52 116 -- --
200.45 0.661 13.8 -- -- -- -- -- -0.109 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.99 temperature 10.0 270 > th dose dependent rect. 6 3
3 22.48 temperature 10.0 270 > th dose dependent rect. 5 5
4 22.61 radiation 1.0 270 < th dose dependent sin 7 NA
6 22.79 humidity 80.0 270 > th dose independent rect. 24 5
9 22.91 humidity 60.0 270 > th dose dependent rect. 24 5
14 23.05 precipitation 0.1 270 < th dose independent rect. 5 20
15 23.05 precipitation 0.1 270 < th dose dependent rect. 5 20
18 23.12 radiation 1.0 270 > th dose independent sin 8 NA
22 23.18 wind 9.0 270 < th dose independent rect. 5 20
23 23.18 temperature 10.0 270 > th dose dependent rect. 7 1
24 23.19 radiation 1.0 270 < th dose independent sin 8 NA
25 23.19 wind 5.0 270 < th dose independent rect. 6 3
30 23.25 radiation 1.0 270 < th dose dependent rect. 1 4
35 23.30 radiation 1.0 270 < th dose independent rect. 1 4
38 23.31 precipitation 0.1 270 < th dose independent rect. 1 4
42 23.31 precipitation 0.1 270 < th dose dependent rect. 1 4
43 23.32 wind 9.0 270 < th dose independent rect. 1 4
44 23.32 temperature 10.0 270 > th dose independent rect. 1 4
46 23.32 temperature 30.0 270 < th dose independent rect. 1 4
47 23.32 humidity 50.0 270 > th dose independent rect. 1 4
50 23.32 atmosphere 995.0 270 > th dose independent rect. 1 4
51 23.32 atmosphere 1010.0 270 < th dose independent rect. 1 4
56 23.32 temperature 10.0 270 > th dose independent rect. 5 20
60 23.37 temperature 10.0 270 > th dose dependent rect. 1 4
62 23.39 radiation 1.0 270 < th dose dependent rect. 24 13
68 23.41 radiation 1.0 270 < th dose dependent rect. 24 11
71 23.43 radiation 40.0 270 < th dose independent rect. 6 3
72 23.43 temperature 15.0 270 > th dose independent rect. 5 6
78 23.46 wind 7.0 270 < th dose independent rect. 5 6
103 23.49 precipitation 0.1 270 < th dose independent rect. 6 3
104 23.49 precipitation 0.1 270 < th dose dependent rect. 6 3
106 23.50 temperature 10.0 270 > th dose independent rect. 6 3
109 23.50 humidity 50.0 270 > th dose independent rect. 6 3
110 23.50 atmosphere 995.0 270 > th dose independent rect. 6 3
111 23.50 atmosphere 1015.0 270 < th dose independent rect. 6 3
112 23.50 temperature 10.0 270 > th dose independent rect. 9 21
113 23.51 wind 9.0 270 < th dose dependent rect. 6 3
120 23.57 temperature 30.0 270 < th dose independent rect. 6 3
121 23.57 radiation 1.0 270 > th dose independent rect. 6 3
141 23.74 wind 9.0 270 < th dose dependent rect. 5 6
148 23.79 temperature 15.0 270 > th dose independent rect. 11 18
155 23.87 radiation 1.0 270 < th dose independent rect. 24 13
181 23.89 radiation 1.0 270 < th dose independent rect. 24 11
185 23.92 radiation 1.0 270 > th dose independent rect. 4 6
200 23.94 wind 9.0 270 < th dose dependent rect. 1 4
206 23.98 wind 5.0 270 < th dose independent rect. 7 1
219 24.03 precipitation 0.1 270 < th dose independent rect. 5 5
221 24.03 precipitation 0.1 270 < th dose dependent rect. 5 5
230 24.07 humidity 50.0 270 > th dose independent rect. 5 5
231 24.07 atmosphere 995.0 270 > th dose independent rect. 5 5
232 24.07 atmosphere 1015.0 270 < th dose independent rect. 5 5
239 24.10 wind 9.0 270 < th dose independent rect. 9 21
251 24.13 humidity 60.0 10 > th dose dependent rect. 2 5
253 24.14 humidity 80.0 10 > th dose independent rect. 2 5
299 24.30 radiation 40.0 270 < th dose independent rect. 7 1
300 24.30 atmosphere 1015.0 270 < th dose independent rect. 10 19
308 24.34 precipitation 0.1 270 < th dose independent rect. 15 10
309 24.34 wind 9.0 10 < th dose independent rect. 7 19
312 24.34 precipitation 0.1 270 < th dose dependent rect. 15 10
314 24.36 precipitation 0.1 270 < th dose independent rect. 7 1
315 24.36 atmosphere 1015.0 270 < th dose independent rect. 9 21
316 24.36 precipitation 0.1 270 < th dose dependent rect. 7 1
321 24.38 temperature 20.0 270 > th dose independent rect. 2 1
322 24.38 temperature 10.0 270 > th dose independent rect. 7 1
324 24.38 temperature 30.0 270 < th dose independent rect. 7 1
325 24.38 humidity 50.0 270 > th dose independent rect. 7 1
327 24.38 atmosphere 995.0 270 > th dose independent rect. 7 1
328 24.38 atmosphere 1015.0 270 < th dose independent rect. 7 1
330 24.38 temperature 10.0 270 > th dose independent rect. 8 23
333 24.39 wind 7.0 90 < th dose independent rect. 7 18
341 24.40 wind 1.0 270 > th dose independent rect. 6 3
344 24.42 wind 9.0 270 < th dose independent rect. 11 18
357 24.46 atmosphere 995.0 270 > th dose independent rect. 11 18
373 24.48 atmosphere 995.0 270 > th dose independent rect. 9 21
388 24.52 radiation 10.0 90 < th dose independent rect. 3 3
396 24.53 precipitation 0.1 10 < th dose independent rect. 7 19
400 24.53 precipitation 0.1 10 < th dose dependent rect. 7 19
404 24.54 wind 9.0 270 < th dose dependent rect. 7 1
418 24.58 wind 7.0 10 < th dose independent rect. 2 5
420 24.58 atmosphere 995.0 270 > th dose dependent rect. 1 4
422 24.59 temperature 10.0 10 > th dose independent rect. 2 5
424 24.59 temperature 30.0 10 < th dose independent rect. 2 5
425 24.59 humidity 50.0 10 > th dose independent rect. 2 5
428 24.59 atmosphere 995.0 10 > th dose independent rect. 2 5
429 24.59 atmosphere 1015.0 10 < th dose independent rect. 2 5
430 24.59 radiation 20.0 10 < th dose independent rect. 2 5
434 24.59 temperature 10.0 10 > th dose independent rect. 7 19
438 24.60 wind 9.0 10 < th dose dependent rect. 2 5
443 24.61 radiation 40.0 10 < th dose dependent rect. 2 5
475 24.64 temperature 30.0 270 < th dose independent rect. 5 5
502 24.66 temperature 10.0 90 > th dose independent rect. 7 18
516 24.67 precipitation 0.1 270 < th dose independent rect. 9 21
522 24.67 precipitation 0.1 270 < th dose dependent rect. 9 21
529 24.69 temperature 20.0 10 > th dose independent rect. 12 19
539 24.70 wind 9.0 270 < th dose independent rect. 15 10
546 24.72 humidity 50.0 270 > th dose independent rect. 5 19
547 24.72 temperature 10.0 10 > th dose dependent rect. 2 5
573 24.75 temperature 10.0 270 > th dose independent rect. 15 10
574 24.75 temperature 10.0 270 > th dose independent rect. 1 14
575 24.75 atmosphere 995.0 270 > th dose independent rect. 1 14
576 24.75 atmosphere 1015.0 270 < th dose independent rect. 1 14
582 24.76 radiation 40.0 270 < th dose independent rect. 15 10
588 24.78 precipitation 0.1 10 < th dose independent rect. 2 5
590 24.78 precipitation 0.1 10 < th dose dependent rect. 2 5
622 24.82 humidity 50.0 270 > th dose dependent rect. 6 3
698 24.87 precipitation 0.1 270 < th dose independent rect. 1 14
703 24.87 precipitation 0.1 270 < th dose dependent rect. 1 14
709 24.89 precipitation 0.1 270 < th dose independent rect. 10 19
714 24.89 precipitation 0.1 270 < th dose dependent rect. 10 19
749 24.95 atmosphere 995.0 270 > th dose independent rect. 5 19
753 24.96 radiation 1.0 270 > th dose independent rect. 7 1
754 24.96 wind 1.0 270 > th dose independent rect. 1 4
773 24.99 temperature 10.0 10 > th dose dependent rect. 7 5
777 25.00 wind 1.0 270 > th dose independent rect. 7 1
804 25.01 radiation 40.0 270 < th dose dependent rect. 6 3
806 25.02 wind 1.0 270 > th dose independent rect. 5 5
807 25.02 wind 9.0 1440 < th dose independent rect. 3 5
808 25.02 temperature 10.0 1440 > th dose independent rect. 3 5
812 25.02 temperature 30.0 1440 < th dose independent rect. 3 5
816 25.02 humidity 50.0 1440 > th dose independent rect. 3 5
821 25.02 atmosphere 995.0 1440 > th dose independent rect. 3 5
826 25.02 temperature 10.0 1440 > th dose independent rect. 8 19
919 25.14 radiation 40.0 270 < th dose independent rect. 5 20
927 25.15 wind 9.0 270 < th dose independent rect. 1 14
1000 25.27 humidity 90.0 90 < th dose independent rect. 7 4