Os02g0557100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AIG1 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0557100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : AIG1 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.75 | 0.219 | 12.6 | -0.396 | 0.483 | 0.867 | 0.195 | -0.936 | -0.33 | 19.7 | 19.3 | 12 | -- | -- |
| 22.58 | 0.223 | 12.6 | -0.244 | 0.489 | 0.86 | 0.248 | -- | -0.285 | 19.7 | 18.1 | 18 | -- | -- |
| 21.85 | 0.218 | 12.6 | -0.405 | 0.484 | 0.879 | -- | -0.956 | -0.332 | 19.7 | 19.14 | 11 | -- | -- |
| 22.75 | 0.224 | 12.6 | -0.249 | 0.49 | 0.857 | -- | -- | -0.284 | 19.7 | 18.1 | 18 | -- | -- |
| 27.23 | 0.243 | 12.6 | -0.555 | -- | 1.04 | -- | -1.53 | -0.385 | -- | 21.48 | 356 | -- | -- |
| 32.4 | 0.267 | 12.5 | -0.0638 | 0.612 | -- | 0.273 | -- | -0.144 | 17.8 | -- | -- | -- | -- |
| 32.58 | 0.267 | 12.5 | -0.0654 | 0.613 | -- | -- | -- | -0.143 | 17.8 | -- | -- | -- | -- |
| 28.81 | 0.25 | 12.6 | -0.323 | -- | 1.04 | -- | -- | -0.325 | -- | 18.11 | 346 | -- | -- |
| 24.23 | 0.231 | 12.6 | -- | 0.498 | 0.749 | -- | -- | -0.243 | 19.4 | 18.5 | 13 | -- | -- |
| 52.09 | 0.337 | 12.5 | -0.0845 | -- | -- | -- | -- | -0.157 | -- | -- | -- | -- | -- |
| 32.69 | 0.267 | 12.5 | -- | 0.614 | -- | -- | -- | -0.135 | 17.8 | -- | -- | -- | -- |
| 31.19 | 0.26 | 12.5 | -- | -- | 0.884 | -- | -- | -0.273 | -- | 20.44 | 343 | -- | -- |
| 52.28 | 0.337 | 12.5 | -- | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.29 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 2 | 21.34 | temperature | 20 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 3 | 21.40 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 5 | 21.43 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 9 | 21.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 10 | 21.51 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 25 | 21.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 15 |
| 29 | 21.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 35 | 21.78 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 45 | 21.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 51 | 21.84 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 67 | 21.89 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 175 | 22.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 3 |
| 185 | 22.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 228 | 22.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 232 | 22.26 | temperature | 20 | 90 | > th | dose dependent | rect. | 6 | 20 |
| 234 | 22.27 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 248 | 22.29 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 324 | 22.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 407 | 22.45 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 437 | 22.47 | temperature | 20 | 4320 | > th | dose dependent | rect. | 6 | 23 |
| 442 | 22.48 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 462 | 22.48 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 23 |
| 465 | 22.48 | temperature | 20 | 4320 | > th | dose dependent | rect. | 9 | 23 |
| 469 | 22.48 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 554 | 22.52 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 583 | 22.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 603 | 22.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 697 | 22.58 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 751 | 22.61 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 837 | 22.66 | temperature | 25 | 4320 | > th | dose independent | rect. | 2 | 20 |
| 874 | 22.68 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 875 | 22.68 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 931 | 22.71 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 19 |
| 951 | 22.72 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 16 |
| 959 | 22.72 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 973 | 22.73 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 2 |