Os02g0557000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0557000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.05 | 0.412 | 7.83 | -0.633 | 1.28 | 1.67 | 0.21 | 1.28 | -0.47 | 5.55 | 9.641 | 20 | -- | -- |
| 78.35 | 0.412 | 7.86 | -0.797 | 1.29 | 1.69 | 0.137 | -- | -0.525 | 5.53 | 15.2 | 19 | -- | -- |
| 77.14 | 0.409 | 7.83 | -0.644 | 1.28 | 1.66 | -- | 1.17 | -0.472 | 5.57 | 10.55 | 19 | -- | -- |
| 78.24 | 0.412 | 7.86 | -0.802 | 1.27 | 1.62 | -- | -- | -0.517 | 5.58 | 15.2 | 19 | -- | -- |
| 148.72 | 0.571 | 7.83 | -0.485 | -- | 0.76 | -- | 0.788 | -0.334 | -- | 10.55 | 19 | -- | -- |
| 104.6 | 0.479 | 7.8 | -0.47 | 1.01 | -- | -0.262 | -- | -0.28 | 6.9 | -- | -- | -- | -- |
| 104.78 | 0.479 | 7.8 | -0.475 | 1.01 | -- | -- | -- | -0.279 | 6.91 | -- | -- | -- | -- |
| 149.13 | 0.569 | 7.85 | -0.595 | -- | 0.782 | -- | -- | -0.365 | -- | 2.637 | 2 | -- | -- |
| 93.63 | 0.453 | 7.82 | -- | 1.17 | 1.23 | -- | -- | -0.377 | 5.83 | 15.2 | 19 | -- | -- |
| 157.95 | 0.587 | 7.82 | -0.453 | -- | -- | -- | -- | -0.26 | -- | -- | -- | -- | -- |
| 110.71 | 0.492 | 7.79 | -- | 1 | -- | -- | -- | -0.226 | 6.94 | -- | -- | -- | -- |
| 157.97 | 0.587 | 7.83 | -- | -- | 0.599 | -- | -- | -0.277 | -- | 3.138 | 3 | -- | -- |
| 163.37 | 0.597 | 7.81 | -- | -- | -- | -- | -- | -0.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.51 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 6 | 75.53 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 13 |
| 7 | 75.54 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 8 | 75.56 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 21 | 75.57 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 10 |
| 39 | 75.60 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 46 | 75.62 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 65 | 75.79 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 7 |
| 67 | 75.81 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 70 | 75.84 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 4 |
| 86 | 75.93 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 96 | 75.99 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 99 | 76.07 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 133 | 76.12 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 155 | 76.45 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 160 | 76.62 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 189 | 76.79 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 21 |
| 190 | 76.79 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 193 | 76.84 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 208 | 77.00 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 216 | 77.06 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 12 |
| 224 | 77.21 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 234 | 77.31 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 8 | 23 |
| 237 | 77.33 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 247 | 77.51 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 248 | 77.53 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 5 |
| 261 | 77.66 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 262 | 77.68 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 270 | 77.77 | temperature | 10.0 | 270 | > th | dose dependent | no | NA | NA |
| 277 | 77.82 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 294 | 77.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 295 | 77.93 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 303 | 77.97 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 311 | 78.03 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 17 | 23 |
| 312 | 78.04 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 320 | 78.08 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 325 | 78.09 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 331 | 78.12 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 341 | 78.19 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 385 | 78.32 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 391 | 78.32 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 23 | 23 |
| 392 | 78.33 | wind | 7.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 428 | 78.46 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 430 | 78.47 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 431 | 78.47 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 442 | 78.50 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 2 |
| 450 | 78.51 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 452 | 78.52 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 453 | 78.52 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 14 |
| 457 | 78.53 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 461 | 78.54 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 466 | 78.55 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 21 |
| 482 | 78.59 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 494 | 78.63 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 496 | 78.63 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 513 | 78.67 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 582 | 78.82 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 591 | 78.83 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 596 | 78.84 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 618 | 78.91 | temperature | 30.0 | 10 | < th | dose dependent | no | NA | NA |
| 641 | 78.95 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 646 | 78.95 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 658 | 78.97 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 680 | 79.02 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 686 | 79.02 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 695 | 79.04 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 696 | 79.05 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 698 | 79.05 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 729 | 79.11 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 731 | 79.11 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 860 | 79.34 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 869 | 79.36 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 939 | 79.48 | temperature | 10.0 | 10 | > th | dose dependent | sin | 19 | NA |
| 948 | 79.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |