Os02g0555700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Chaperone protein dnaJ 10 (AtJ10) (AtDjC10).
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Os02g0555700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Chaperone protein dnaJ 10 (AtJ10) (AtDjC10).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 332.57 | 0.857 | 6.79 | -0.217 | 4.9 | -5.37 | -0.184 | -8.04 | 0.117 | 7.69 | 1.353 | 1459 | 8.14 | 22 |
| 337.77 | 0.856 | 6.89 | -0.746 | 4.85 | -3.91 | -0.12 | -- | -0.101 | 7.58 | 3.616 | 1477 | 8.85 | 21.7 |
| 332.29 | 0.849 | 6.79 | -0.271 | 4.9 | -5.46 | -- | -8.01 | 0.12 | 7.66 | 1.428 | 1461 | 8.28 | 22.2 |
| 337.08 | 0.855 | 6.89 | -0.82 | 4.86 | -3.87 | -- | -- | -0.0825 | 7.59 | 3.551 | 1475 | 8.85 | 21.7 |
| 1476.72 | 1.8 | 6.92 | -0.329 | -- | -2.14 | -- | 0.565 | 0.487 | -- | 2.01 | 1495 | 8.18 | 21.9 |
| 559.76 | 1.11 | 6.78 | -0.332 | 5.11 | -- | 0.0632 | -- | 0.463 | 7.84 | -- | -- | -- | -- |
| 559.78 | 1.11 | 6.78 | -0.331 | 5.11 | -- | -- | -- | 0.463 | 7.84 | -- | -- | -- | -- |
| 1477.94 | 1.8 | 6.92 | -0.279 | -- | -2.15 | -- | -- | 0.459 | -- | 3.551 | 1475 | 8.85 | 21.7 |
| 353.17 | 0.875 | 6.9 | -- | 4.89 | -3.63 | -- | -- | -0.0717 | 7.59 | 4.317 | 1475 | 8.92 | 21.5 |
| 1975.24 | 2.08 | 6.91 | -0.272 | -- | -- | -- | -- | 0.533 | -- | -- | -- | -- | -- |
| 562.66 | 1.11 | 6.77 | -- | 5.11 | -- | -- | -- | 0.5 | 7.85 | -- | -- | -- | -- |
| 1479.99 | 1.8 | 6.92 | -- | -- | -2.15 | -- | -- | 0.49 | -- | 3.551 | 1475 | 8.85 | 21.7 |
| 1977.18 | 2.08 | 6.9 | -- | -- | -- | -- | -- | 0.563 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 326.42 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 2 | 326.75 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 3 | 327.02 | temperature | 30 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 4 | 327.05 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 15 | 328.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 15 |
| 17 | 328.15 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 21 | 328.16 | temperature | 30 | 14400 | < th | dose independent | rect. | 13 | 11 |
| 112 | 329.38 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 127 | 329.59 | temperature | 30 | 14400 | < th | dose independent | sin | 16 | NA |
| 137 | 329.79 | temperature | 25 | 14400 | > th | dose dependent | rect. | 16 | 9 |
| 138 | 329.83 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 7 |
| 183 | 330.12 | temperature | 30 | 14400 | > th | dose independent | sin | 15 | NA |
| 188 | 330.23 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 227 | 330.85 | temperature | 25 | 14400 | > th | dose dependent | sin | 13 | NA |
| 270 | 331.71 | temperature | 25 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 299 | 332.07 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 15 |
| 310 | 332.07 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 22 |
| 363 | 332.76 | temperature | 25 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 428 | 333.04 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 484 | 333.23 | temperature | 25 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 523 | 333.47 | temperature | 25 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 562 | 333.89 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |
| 664 | 334.11 | temperature | 25 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 687 | 334.28 | humidity | 90 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 709 | 334.57 | temperature | 25 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 763 | 335.09 | temperature | 25 | 14400 | > th | dose dependent | rect. | 6 | 22 |
| 765 | 335.10 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 770 | 335.11 | temperature | 25 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 820 | 335.47 | temperature | 25 | 14400 | > th | dose dependent | rect. | 20 | 23 |
| 847 | 335.91 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 878 | 336.27 | temperature | 30 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 925 | 336.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |