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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0554400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.29 (0.0371) R2 : 0.229
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 0.733 (0.101) R2dE : 0.111 R2E : 0.165
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.412 (0.0854) R2dN8 : 0.0632 R2N8 : 0.117
σ : 0.678
deviance : 211.79
__
_____
C
peak time of C : --
E
wheather : temperature
threshold : 23.2
memory length : 2010
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
204.31 0.672 3.3 -0.249 0.294 0.818 -0.605 -0.163 0.337 11.1 23.2 2139 -- --
204.39 0.666 3.29 -0.205 0.282 0.81 -0.592 -- 0.356 11.2 23.21 2138 -- --
205.85 0.668 3.3 -0.247 0.292 0.817 -- -0.0728 0.343 11.1 23.2 2142 -- --
205.85 0.668 3.3 -0.215 0.298 0.817 -- -- 0.35 11.1 23.22 2143 -- --
210.83 0.676 3.3 -0.208 -- 0.778 -- -0.0238 0.364 -- 23.2 2018 -- --
230.96 0.712 3.22 0.152 0.212 -- -0.645 -- 0.709 11.1 -- -- -- --
232.73 0.714 3.22 0.126 0.215 -- -- -- 0.707 11.1 -- -- -- --
210.82 0.676 3.3 -0.203 -- 0.772 -- -- 0.369 -- 23.2 2011 -- --
204.8 0.667 3.29 -- 0.354 0.721 -- -- 0.414 10.5 23.2 686 -- --
235.63 0.717 3.23 0.121 -- -- -- -- 0.705 -- -- -- -- --
233.15 0.714 3.22 -- 0.214 -- -- -- 0.693 11.1 -- -- -- --
211.79 0.678 3.29 -- -- 0.733 -- -- 0.412 -- 23.2 2010 -- --
236.01 0.717 3.23 -- -- -- -- -- 0.692 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 197.86 temperature 15 270 > th dose dependent rect. 1 15
6 199.66 temperature 20 720 > th dose dependent rect. 20 13
10 200.27 temperature 10 720 > th dose dependent rect. 19 14
27 201.65 temperature 20 720 > th dose dependent sin 8 NA
33 201.75 temperature 30 720 < th dose dependent rect. 18 16
36 201.91 temperature 30 720 < th dose dependent sin 10 NA
37 201.92 temperature 20 1440 > th dose dependent rect. 18 1
38 201.93 temperature 10 720 > th dose dependent rect. 21 8
59 202.25 temperature 30 270 < th dose dependent rect. 5 6
76 202.61 temperature 10 720 > th dose dependent rect. 20 18
95 202.91 temperature 10 720 > th dose dependent sin 9 NA
101 203.09 temperature 20 720 > th dose dependent rect. 2 6
108 203.13 temperature 30 270 < th dose dependent rect. 7 2
118 203.24 temperature 10 720 > th dose dependent rect. 2 7
141 203.45 temperature 25 720 < th dose dependent rect. 24 1
144 203.46 temperature 25 720 < th dose dependent rect. 23 6
152 203.50 temperature 25 720 < th dose dependent rect. 21 10
153 203.51 temperature 25 720 < th dose dependent rect. 23 4
154 203.51 temperature 25 720 < th dose dependent rect. 22 8
202 203.79 temperature 20 720 > th dose dependent rect. 3 2
208 203.81 temperature 30 1440 < th dose dependent rect. 18 1
250 204.02 radiation 30 1440 < th dose dependent rect. 18 10
323 204.36 wind 5 14400 < th dose independent rect. 7 7
333 204.39 wind 9 43200 > th dose independent rect. 10 2
342 204.44 wind 5 14400 < th dose independent rect. 4 10
359 204.50 temperature 20 1440 > th dose dependent rect. 14 19
364 204.52 wind 5 14400 > th dose independent rect. 6 8
368 204.54 wind 7 43200 > th dose dependent rect. 9 5
394 204.60 wind 5 14400 > th dose independent rect. 4 10
403 204.64 wind 9 43200 > th dose independent rect. 9 5
426 204.69 wind 9 43200 < th dose independent rect. 9 5
427 204.70 radiation 1 14400 > th dose independent rect. 4 2
438 204.70 wind 7 43200 > th dose dependent rect. 10 2
443 204.71 temperature 20 1440 > th dose dependent rect. 14 15
451 204.74 wind 5 14400 < th dose independent rect. 24 14
459 204.75 temperature 20 1440 > th dose dependent sin 16 NA
485 204.82 temperature 25 270 < th dose independent rect. 7 2
521 204.90 radiation 1 14400 < th dose independent rect. 19 11
536 204.93 wind 5 14400 > th dose independent rect. 24 14
542 204.94 radiation 1 14400 < th dose independent rect. 2 4
552 204.96 radiation 1 14400 < th dose independent rect. 23 7
565 204.98 temperature 20 1440 > th dose dependent rect. 3 20
685 205.22 wind 7 43200 < th dose independent rect. 10 1
718 205.28 wind 9 43200 < th dose independent rect. 2 14
725 205.29 wind 9 43200 > th dose independent rect. 8 8
727 205.29 temperature 20 1440 > th dose dependent no NA NA
740 205.31 wind 7 43200 > th dose dependent rect. 3 11
741 205.31 temperature 20 1440 > th dose dependent rect. 6 23
795 205.38 wind 9 43200 < th dose dependent rect. 9 1
814 205.41 wind 1 43200 > th dose dependent rect. 9 1
839 205.44 wind 9 43200 < th dose independent rect. 7 9
889 205.49 wind 9 43200 < th dose independent rect. 20 20
906 205.51 wind 9 43200 > th dose independent rect. 20 19
913 205.52 wind 9 43200 > th dose independent rect. 2 13
996 205.59 temperature 30 1440 < th dose dependent rect. 4 18