Os02g0551600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0551600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 328.16 | 0.851 | 3.85 | -2.39 | 1.35 | 2.79 | -0.822 | -5.11 | 0.0939 | 6.75 | 26.41 | 1009 | 7.24 | -- |
| 331.53 | 0.848 | 3.77 | -1.51 | 1.33 | 2.3 | -0.616 | -- | 0.204 | 6.72 | 26.17 | 976 | 7.09 | -- |
| 328.9 | 0.845 | 3.86 | -2.42 | 1.31 | 2.82 | -- | -5.09 | 0.0306 | 6.81 | 26.07 | 988 | 6.82 | -- |
| 332.81 | 0.85 | 3.76 | -1.51 | 1.32 | 2.28 | -- | -- | 0.172 | 6.75 | 26.04 | 976 | 7.07 | -- |
| 404.8 | 0.937 | 3.93 | -2.46 | -- | 3.12 | -- | -4.41 | -0.211 | -- | 25.16 | 1077 | 7.29 | -- |
| 499.67 | 1.05 | 3.77 | -0.99 | 1.66 | -- | 0.0901 | -- | 0.118 | 5.41 | -- | -- | -- | -- |
| 499.69 | 1.05 | 3.77 | -0.99 | 1.67 | -- | -- | -- | 0.118 | 5.42 | -- | -- | -- | -- |
| 402.8 | 0.935 | 3.9 | -1.62 | -- | 2.85 | -- | -- | -0.345 | -- | 22.9 | 907 | 6.74 | -- |
| 389.87 | 0.92 | 3.71 | -- | 1.37 | 1.97 | -- | -- | 0.356 | 6.58 | 26.23 | 971 | 6.92 | -- |
| 644.18 | 1.19 | 3.79 | -0.934 | -- | -- | -- | -- | 0.159 | -- | -- | -- | -- | -- |
| 525.5 | 1.07 | 3.75 | -- | 1.65 | -- | -- | -- | 0.228 | 5.44 | -- | -- | -- | -- |
| 467.99 | 1.01 | 3.86 | -- | -- | 2.53 | -- | -- | -0.128 | -- | 22.85 | 895 | 6.74 | -- |
| 667.17 | 1.21 | 3.77 | -- | -- | -- | -- | -- | 0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 329.12 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 9 | 338.36 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 21 | 341.87 | humidity | 70 | 720 | > th | dose independent | rect. | 19 | 8 |
| 28 | 343.28 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 78 | 349.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 11 |
| 81 | 350.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 8 |
| 83 | 350.19 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 111 | 350.22 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 114 | 350.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 120 | 350.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 137 | 352.37 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 165 | 353.46 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 166 | 353.46 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 177 | 353.49 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 179 | 353.54 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 340 | 358.15 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 358 | 358.54 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 10 |
| 367 | 359.04 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 375 | 359.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 397 | 359.82 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 398 | 359.84 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 412 | 359.86 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 413 | 359.89 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 437 | 360.05 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 452 | 360.51 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 21 |
| 587 | 362.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 591 | 362.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 599 | 362.24 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 601 | 362.27 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 606 | 362.30 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 651 | 362.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 672 | 362.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 22 |
| 687 | 362.90 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 782 | 362.92 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 802 | 362.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 803 | 362.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 810 | 362.99 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 820 | 363.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 22 |
| 823 | 363.02 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 825 | 363.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 844 | 363.05 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 16 |
| 880 | 363.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 890 | 363.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 961 | 363.69 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 968 | 363.81 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |