Os02g0550600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Plant neutral invertase family protein.
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Os02g0550600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Plant neutral invertase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.65 | 0.403 | 10.4 | -0.874 | 0.869 | 0.502 | 0.413 | -0.542 | -0.283 | 13.8 | 20.03 | 14 | -- | -- |
| 74.56 | 0.402 | 10.4 | -0.837 | 0.87 | 0.642 | 0.407 | -- | -0.257 | 13.8 | 19.2 | 6 | -- | -- |
| 74.2 | 0.401 | 10.4 | -0.837 | 0.869 | 0.512 | -- | -0.397 | -0.276 | 13.8 | 20.1 | 13 | -- | -- |
| 74.99 | 0.403 | 10.4 | -0.771 | 0.857 | 0.541 | -- | -- | -0.261 | 13.8 | 20.07 | 14 | -- | -- |
| 115.77 | 0.504 | 10.4 | -0.912 | -- | 0.803 | -- | -0.207 | -0.339 | -- | 20.1 | 13 | -- | -- |
| 86.42 | 0.436 | 10.3 | -0.636 | 0.982 | -- | 0.217 | -- | -0.164 | 13.7 | -- | -- | -- | -- |
| 86.6 | 0.436 | 10.3 | -0.629 | 0.982 | -- | -- | -- | -0.163 | 13.7 | -- | -- | -- | -- |
| 115.99 | 0.504 | 10.4 | -0.876 | -- | 0.815 | -- | -- | -0.331 | -- | 20.1 | 13 | -- | -- |
| 89.98 | 0.444 | 10.3 | -- | 0.899 | 0.408 | -- | -- | -0.156 | 13.8 | 20.07 | 14 | -- | -- |
| 145.28 | 0.563 | 10.4 | -0.669 | -- | -- | -- | -- | -0.185 | -- | -- | -- | -- | -- |
| 97.03 | 0.461 | 10.3 | -- | 0.994 | -- | -- | -- | -0.0926 | 13.7 | -- | -- | -- | -- |
| 135.48 | 0.544 | 10.4 | -- | -- | 0.687 | -- | -- | -0.214 | -- | 20.03 | 2 | -- | -- |
| 157.08 | 0.585 | 10.3 | -- | -- | -- | -- | -- | -0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.40 | temperature | 20.0 | 10 | > th | dose independent | rect. | 12 | 20 |
| 3 | 64.70 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 19 |
| 44 | 68.19 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 66 | 69.51 | temperature | 20.0 | 10 | > th | dose independent | rect. | 22 | 10 |
| 67 | 69.53 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 9 |
| 73 | 69.83 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 8 |
| 92 | 70.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 19 |
| 95 | 71.05 | temperature | 20.0 | 90 | > th | dose independent | rect. | 23 | 19 |
| 103 | 71.32 | temperature | 20.0 | 10 | > th | dose independent | rect. | 24 | 18 |
| 108 | 71.39 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 109 | 71.40 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 111 | 71.41 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 9 |
| 122 | 71.58 | temperature | 20.0 | 270 | > th | dose independent | rect. | 21 | 21 |
| 167 | 72.44 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 199 | 72.75 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 200 | 72.76 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 10 |
| 216 | 72.93 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 23 |
| 236 | 73.11 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 14 |
| 237 | 73.12 | temperature | 20.0 | 10 | > th | dose independent | rect. | 13 | 14 |
| 241 | 73.14 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 18 |
| 259 | 73.31 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 15 |
| 275 | 73.42 | temperature | 20.0 | 10 | > th | dose independent | sin | 12 | NA |
| 276 | 73.43 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 301 | 73.58 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 22 |
| 305 | 73.60 | temperature | 20.0 | 270 | < th | dose independent | rect. | 8 | 19 |
| 316 | 73.67 | temperature | 20.0 | 10 | > th | dose independent | no | NA | NA |
| 319 | 73.68 | wind | 5.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 324 | 73.72 | wind | 7.0 | 270 | < th | dose independent | rect. | 16 | 20 |
| 336 | 73.79 | humidity | 80.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 347 | 73.86 | temperature | 20.0 | 10 | < th | dose independent | rect. | 10 | 20 |
| 361 | 73.92 | temperature | 20.0 | 10 | < th | dose independent | rect. | 10 | 22 |
| 365 | 73.93 | temperature | 20.0 | 90 | < th | dose independent | rect. | 11 | 18 |
| 367 | 73.94 | wind | 5.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 375 | 73.97 | wind | 1.0 | 90 | > th | dose independent | rect. | 18 | 19 |
| 412 | 74.16 | temperature | 20.0 | 10 | < th | dose independent | rect. | 7 | 23 |
| 416 | 74.18 | temperature | 20.0 | 10 | < th | dose independent | rect. | 20 | 23 |
| 427 | 74.20 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 432 | 74.21 | temperature | 20.0 | 10 | < th | dose independent | rect. | 13 | 23 |
| 434 | 74.23 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 23 |
| 438 | 74.24 | temperature | 20.0 | 10 | < th | dose independent | rect. | 17 | 23 |
| 446 | 74.26 | temperature | 20.0 | 10 | < th | dose independent | sin | 11 | NA |
| 448 | 74.26 | temperature | 20.0 | 10 | < th | dose independent | no | NA | NA |
| 477 | 74.36 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 494 | 74.40 | temperature | 20.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 495 | 74.40 | temperature | 20.0 | 10 | < th | dose independent | rect. | 23 | 23 |
| 504 | 74.42 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 24 | 5 |
| 508 | 74.44 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 22 | 10 |
| 523 | 74.47 | temperature | 20.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 550 | 74.57 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 660 | 74.86 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 667 | 74.86 | wind | 1.0 | 90 | > th | dose dependent | rect. | 12 | 6 |
| 679 | 74.88 | radiation | 1.0 | 30 | < th | dose dependent | sin | 14 | NA |
| 684 | 74.90 | temperature | 20.0 | 90 | < th | dose independent | sin | 12 | NA |
| 690 | 74.91 | temperature | 20.0 | 10 | < th | dose independent | rect. | 16 | 14 |
| 724 | 74.97 | temperature | 20.0 | 10 | < th | dose independent | rect. | 14 | 16 |
| 737 | 75.00 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 748 | 75.01 | temperature | 20.0 | 10 | < th | dose independent | rect. | 16 | 16 |
| 798 | 75.08 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 801 | 75.09 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 806 | 75.11 | temperature | 20.0 | 90 | < th | dose independent | rect. | 15 | 14 |
| 842 | 75.16 | temperature | 20.0 | 10 | > th | dose independent | rect. | 4 | 23 |
| 844 | 75.16 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 24 | 8 |
| 853 | 75.18 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 854 | 75.18 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 855 | 75.18 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 5 |
| 863 | 75.19 | temperature | 20.0 | 90 | < th | dose independent | rect. | 17 | 12 |
| 872 | 75.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 5 |
| 873 | 75.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 5 |
| 879 | 75.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 886 | 75.23 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 892 | 75.24 | temperature | 20.0 | 10 | < th | dose independent | rect. | 20 | 10 |
| 894 | 75.24 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 15 |
| 899 | 75.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 905 | 75.27 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 5 |
| 909 | 75.27 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 916 | 75.29 | temperature | 20.0 | 10 | < th | dose independent | rect. | 20 | 8 |
| 933 | 75.32 | humidity | 60.0 | 90 | > th | dose independent | rect. | 18 | 10 |
| 943 | 75.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 18 |
| 945 | 75.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 18 |
| 946 | 75.35 | radiation | 1.0 | 90 | < th | dose independent | rect. | 18 | 10 |
| 947 | 75.35 | wind | 5.0 | 90 | > th | dose independent | rect. | 12 | 18 |
| 950 | 75.36 | temperature | 20.0 | 10 | < th | dose independent | rect. | 20 | 12 |
| 953 | 75.37 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 3 |
| 954 | 75.37 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 3 |
| 955 | 75.37 | temperature | 30.0 | 30 | < th | dose independent | rect. | 18 | 10 |
| 990 | 75.41 | temperature | 20.0 | 90 | < th | dose independent | rect. | 19 | 10 |