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Os02g0550000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.013) R2 : 0.666
β1 : 0.975 (0.0475) R2dD : 0.32 R2D : 0.216
β2 : 0.681 (0.0338) R2dC : 0.299 R2C : 0.284
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.319 (0.0277) R2dN8 : 0.13 R2N8 : 0.0388
σ : 0.244
deviance : 27.1
__
_____
C
peak time of C : 6.48
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.16 0.216 11 1.33 0.478 -0.593 0.662 1.23 0.482 7.14 20.12 361 -- --
22.15 0.219 11.1 1.11 0.535 -0.521 0.252 -- 0.414 6.25 18 637 -- --
21.95 0.218 11.1 1.28 0.448 -0.619 -- 1.04 0.466 6.95 22.39 378 -- --
22.09 0.219 11.1 1.09 0.476 -0.509 -- -- 0.397 6.32 22.8 556 -- --
27.74 0.245 11.1 1.36 -- -1.02 -- 1.59 0.452 -- 25 475 -- --
26.62 0.242 11.1 0.969 0.678 -- 0.449 -- 0.321 6.6 -- -- -- --
27.1 0.244 11.1 0.975 0.681 -- -- -- 0.319 6.48 -- -- -- --
28.46 0.248 11.1 1.14 -- -0.889 -- -- 0.396 -- 25 491 -- --
51.37 0.334 11.1 -- 0.607 -0.2 -- -- 0.261 6.28 23.02 531 -- --
51.21 0.334 11.1 0.992 -- -- -- -- 0.333 -- -- -- -- --
52.14 0.338 11.1 -- 0.694 -- -- -- 0.21 6.4 -- -- -- --
61.82 0.366 11.1 -- -- -0.725 -- -- 0.249 -- 25.4 451 -- --
77.16 0.41 11.1 -- -- -- -- -- 0.223 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 19.94 temperature 10 720 > th dose dependent rect. 6 13
5 20.14 temperature 10 720 > th dose dependent rect. 1 18
6 20.14 temperature 10 720 > th dose dependent rect. 23 19
34 20.47 temperature 20 270 > th dose dependent rect. 23 20
48 20.60 temperature 10 720 > th dose dependent sin 0 NA
112 20.95 temperature 30 720 < th dose independent rect. 11 19
116 20.96 temperature 30 720 < th dose independent rect. 14 8
118 20.97 temperature 30 720 < th dose independent rect. 14 16
123 20.98 wind 9 43200 < th dose independent rect. 17 22
137 21.01 temperature 30 720 < th dose independent rect. 11 11
139 21.01 wind 9 43200 > th dose independent rect. 17 22
151 21.04 temperature 20 720 > th dose dependent rect. 8 1
155 21.05 temperature 30 720 < th dose independent rect. 10 13
175 21.08 wind 9 43200 < th dose independent rect. 13 22
180 21.09 wind 9 43200 > th dose independent rect. 19 20
187 21.10 wind 9 43200 < th dose independent rect. 23 22
194 21.11 wind 9 43200 < th dose independent rect. 2 19
201 21.11 wind 7 43200 > th dose dependent rect. 19 21
211 21.12 temperature 20 1440 > th dose dependent rect. 17 1
216 21.12 wind 7 43200 > th dose dependent rect. 23 22
219 21.13 wind 7 43200 > th dose dependent rect. 6 15
221 21.13 wind 7 43200 > th dose dependent rect. 2 19
239 21.15 wind 9 43200 > th dose independent rect. 23 22
240 21.15 wind 9 43200 > th dose independent rect. 12 23
241 21.15 wind 9 43200 > th dose dependent sin 18 NA
242 21.15 wind 7 43200 > th dose dependent sin 1 NA
244 21.15 wind 7 43200 > th dose dependent rect. 6 10
249 21.15 wind 7 43200 > th dose dependent rect. 6 21
254 21.16 wind 9 43200 < th dose independent rect. 6 15
261 21.16 wind 9 43200 < th dose independent rect. 2 23
267 21.16 temperature 10 720 > th dose dependent rect. 6 7
268 21.16 wind 7 43200 > th dose dependent rect. 2 14
286 21.16 wind 7 43200 > th dose dependent rect. 12 23
288 21.17 wind 9 43200 < th dose independent no NA NA
289 21.17 wind 9 43200 > th dose independent rect. 2 19
292 21.17 wind 9 43200 < th dose independent rect. 6 21
321 21.17 wind 7 43200 > th dose dependent rect. 15 23
323 21.18 wind 9 43200 > th dose independent rect. 6 21
331 21.18 wind 7 43200 > th dose dependent no NA NA
334 21.18 wind 9 43200 > th dose dependent rect. 10 15
336 21.18 wind 9 43200 > th dose dependent rect. 10 17
339 21.18 wind 9 43200 > th dose dependent rect. 13 19
355 21.19 wind 9 43200 > th dose independent no NA NA
356 21.19 radiation 1 14400 > th dose independent rect. 18 12
357 21.19 wind 9 43200 > th dose independent rect. 6 15
362 21.19 wind 9 43200 > th dose independent rect. 2 23
395 21.20 wind 9 43200 > th dose independent rect. 6 19
396 21.20 wind 9 43200 < th dose independent rect. 5 19
500 21.22 wind 9 43200 > th dose dependent rect. 10 11
515 21.23 radiation 1 14400 > th dose independent rect. 5 1
517 21.23 wind 9 43200 < th dose independent rect. 24 15
529 21.23 temperature 10 1440 > th dose dependent rect. 17 1
542 21.24 wind 9 43200 < th dose independent rect. 2 13
561 21.24 wind 7 43200 > th dose dependent rect. 10 23
562 21.25 radiation 1 14400 < th dose independent rect. 5 1
590 21.25 temperature 20 270 > th dose dependent rect. 6 23
591 21.26 temperature 30 720 < th dose independent sin 16 NA
592 21.26 wind 9 43200 < th dose independent rect. 8 6
613 21.26 temperature 20 270 > th dose dependent rect. 12 23
614 21.27 wind 9 43200 < th dose independent sin 2 NA
623 21.27 wind 9 43200 > th dose independent rect. 10 23
626 21.27 wind 7 43200 > th dose dependent rect. 8 6
629 21.27 wind 1 43200 > th dose dependent rect. 5 10
636 21.28 wind 9 43200 < th dose independent rect. 6 9
637 21.28 radiation 1 14400 < th dose independent rect. 21 9
651 21.28 wind 9 43200 < th dose independent rect. 10 23
652 21.28 wind 9 43200 > th dose dependent sin 14 NA
670 21.29 humidity 80 14400 > th dose independent rect. 17 1
672 21.29 radiation 1 14400 < th dose independent rect. 23 7
742 21.31 wind 9 43200 < th dose dependent rect. 5 10
776 21.33 humidity 80 14400 < th dose independent rect. 17 1
821 21.34 temperature 15 30 > th dose dependent rect. 1 19
824 21.35 humidity 80 14400 > th dose independent rect. 17 3
845 21.36 wind 9 43200 > th dose independent sin 1 NA
851 21.36 wind 9 43200 > th dose independent rect. 24 15
855 21.36 wind 9 43200 > th dose independent rect. 22 18
859 21.36 wind 3 43200 > th dose dependent sin 2 NA
862 21.36 temperature 20 270 > th dose dependent no NA NA
906 21.38 wind 9 43200 > th dose independent rect. 7 8
909 21.38 wind 9 43200 > th dose independent rect. 2 13
994 21.40 wind 9 43200 < th dose dependent sin 3 NA