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Os02g0549700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.6 (0.0182) R2 : 0.471
β1 : -1.07 (0.0668) R2dD : 0.307 R2D : 0.301
β2 : 0.571 (0.0475) R2dC : 0.168 R2C : 0.16
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0185 (0.0389) R2dN8 : 0.000352 R2N8 : 0.00358
σ : 0.343
deviance : 53.65
__
_____
C
peak time of C : 5.41
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
36.47 0.284 9.62 -1.38 0.537 1.04 0.258 0.769 -0.147 5.65 8.203 5667 -- --
36.98 0.283 9.65 -1.53 0.538 0.99 0.296 -- -0.185 5.73 11.23 5546 -- --
36.64 0.282 9.62 -1.37 0.539 1.04 -- 0.792 -0.146 5.63 7.871 5666 -- --
37.17 0.284 9.65 -1.54 0.541 0.996 -- -- -0.192 5.63 9.368 5623 -- --
51.62 0.335 9.63 -1.36 -- 1.1 -- 0.878 -0.137 -- 7.919 5617 -- --
53.46 0.343 9.6 -1.07 0.57 -- 0.272 -- 0.0197 5.42 -- -- -- --
53.65 0.343 9.6 -1.07 0.571 -- -- -- 0.0185 5.41 -- -- -- --
51.92 0.336 9.66 -1.43 -- 0.951 -- -- -0.165 -- 9.893 2748 -- --
77.73 0.411 9.6 -- 0.561 0.337 -- -- 0.131 5.59 28.3 2893 -- --
70.64 0.393 9.61 -1.05 -- -- -- -- 0.0326 -- -- -- -- --
83.63 0.428 9.58 -- 0.554 -- -- -- 0.137 5.48 -- -- -- --
91.66 0.446 9.56 -- -- 0.428 -- -- 0.241 -- 30.1 2749 -- --
99.58 0.466 9.59 -- -- -- -- -- 0.149 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.56 humidity 60.0 14400 > th dose independent rect. 18 1
2 34.75 humidity 60.0 14400 < th dose independent rect. 18 1
3 35.18 precipitation 0.1 43200 < th dose independent rect. 20 1
4 35.18 precipitation 0.1 43200 < th dose dependent rect. 20 1
5 35.19 precipitation 0.1 43200 > th dose independent rect. 20 1
6 35.32 precipitation 0.1 43200 > th dose dependent rect. 20 2
10 35.37 humidity 60.0 14400 > th dose independent rect. 18 5
13 35.39 humidity 60.0 14400 > th dose independent rect. 18 10
15 35.40 humidity 60.0 14400 > th dose independent rect. 18 14
18 35.41 wind 9.0 43200 > th dose dependent rect. 20 10
24 35.49 precipitation 0.1 43200 > th dose dependent rect. 17 5
25 35.52 humidity 60.0 14400 < th dose dependent rect. 17 3
42 35.58 wind 9.0 43200 > th dose independent rect. 20 10
45 35.66 wind 9.0 43200 < th dose independent rect. 20 10
46 35.67 precipitation 0.1 43200 > th dose independent rect. 17 2
47 35.67 precipitation 0.1 43200 < th dose independent rect. 17 2
48 35.67 precipitation 0.1 43200 < th dose dependent rect. 17 2
51 35.72 humidity 50.0 14400 > th dose independent rect. 17 16
52 35.73 wind 9.0 43200 < th dose independent rect. 19 5
58 35.80 wind 9.0 43200 > th dose dependent rect. 17 13
62 35.84 humidity 70.0 14400 < th dose independent rect. 19 12
63 35.84 humidity 50.0 14400 < th dose dependent rect. 16 17
65 35.85 wind 9.0 43200 > th dose independent rect. 20 5
96 35.91 precipitation 0.1 43200 > th dose independent rect. 17 5
97 35.91 precipitation 0.1 43200 < th dose independent rect. 17 5
99 35.91 precipitation 0.1 43200 < th dose dependent rect. 17 5
103 35.93 wind 9.0 43200 > th dose dependent rect. 20 3
128 36.03 wind 9.0 43200 < th dose independent rect. 19 3
131 36.04 wind 7.0 43200 > th dose dependent rect. 20 5
150 36.12 radiation 30.0 4320 < th dose independent rect. 15 17
192 36.32 wind 9.0 43200 > th dose dependent rect. 17 9
193 36.33 radiation 1.0 14400 < th dose independent rect. 16 2
194 36.33 wind 9.0 43200 > th dose dependent rect. 17 7
210 36.38 humidity 50.0 14400 < th dose independent rect. 17 17
218 36.41 radiation 10.0 14400 < th dose independent rect. 16 14
243 36.55 temperature 25.0 4320 > th dose independent rect. 6 2
245 36.55 radiation 1.0 14400 < th dose independent rect. 16 6
279 36.61 radiation 10.0 14400 > th dose independent rect. 17 1
280 36.61 temperature 25.0 4320 < th dose independent rect. 6 2
294 36.62 humidity 80.0 14400 > th dose independent rect. 18 2
334 36.66 wind 9.0 43200 > th dose independent rect. 17 13
338 36.67 wind 9.0 43200 < th dose independent rect. 17 13
339 36.67 temperature 30.0 1440 < th dose independent rect. 17 20
340 36.68 humidity 50.0 14400 < th dose independent rect. 16 1
353 36.74 wind 9.0 43200 < th dose independent rect. 17 7
356 36.74 radiation 30.0 4320 > th dose independent rect. 15 17
363 36.76 temperature 30.0 1440 > th dose independent rect. 18 19
364 36.76 radiation 10.0 14400 > th dose dependent rect. 17 1
414 36.82 temperature 30.0 1440 > th dose independent rect. 12 1
415 36.82 wind 9.0 43200 > th dose independent rect. 17 7
441 36.84 wind 5.0 43200 > th dose dependent rect. 20 1
453 36.85 precipitation 0.1 43200 > th dose dependent sin 19 NA
463 36.87 wind 9.0 43200 > th dose independent rect. 17 9
471 36.90 radiation 1.0 14400 < th dose independent sin 17 NA
523 36.94 temperature 30.0 1440 < th dose independent rect. 2 11
531 36.95 temperature 30.0 1440 < th dose independent rect. 4 9
548 36.98 temperature 30.0 1440 < th dose independent rect. 6 7
557 36.99 temperature 30.0 1440 < th dose independent rect. 10 3
560 36.99 temperature 30.0 1440 < th dose independent rect. 22 15
573 37.00 radiation 40.0 14400 < th dose dependent rect. 17 2
574 37.00 radiation 30.0 14400 < th dose dependent rect. 17 12
577 37.01 radiation 30.0 4320 < th dose independent rect. 15 4
579 37.01 radiation 30.0 4320 < th dose independent rect. 15 8
588 37.01 radiation 30.0 4320 < th dose independent rect. 15 13
594 37.01 radiation 20.0 14400 < th dose dependent rect. 17 2
596 37.01 radiation 30.0 14400 < th dose dependent rect. 17 5
603 37.02 radiation 30.0 4320 < th dose independent rect. 15 2
666 37.04 radiation 20.0 14400 < th dose dependent rect. 17 9
703 37.10 temperature 25.0 4320 > th dose dependent rect. 18 1
740 37.14 temperature 10.0 4320 > th dose dependent rect. 18 1
793 37.18 temperature 10.0 4320 > th dose dependent rect. 1 18
815 37.20 temperature 30.0 4320 < th dose dependent rect. 18 1
827 37.21 wind 9.0 43200 < th dose independent rect. 20 1
845 37.22 temperature 30.0 1440 < th dose independent sin 9 NA
856 37.23 temperature 30.0 1440 > th dose dependent rect. 12 1
864 37.23 temperature 10.0 4320 > th dose dependent rect. 12 23
878 37.24 temperature 10.0 4320 > th dose dependent rect. 9 22
883 37.25 radiation 1.0 14400 > th dose independent sin 17 NA
886 37.25 temperature 10.0 4320 > th dose dependent no NA NA
887 37.25 temperature 25.0 4320 > th dose dependent rect. 7 1
888 37.25 radiation 30.0 4320 > th dose dependent rect. 15 1
914 37.25 temperature 10.0 4320 > th dose dependent rect. 17 23
929 37.26 radiation 30.0 4320 > th dose dependent rect. 15 17
940 37.26 temperature 10.0 4320 > th dose dependent rect. 15 23