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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0546500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.02 (0.0146) R2 : 0.00176
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0277 (0.0308) R2dN8 : 0.00228 R2N8 : 0.00176
σ : 0.276
deviance : 34.92
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.29 0.271 2.95 0.526 0.116 -0.288 -0.102 2.74 0.0621 7.99 30 1514 -- --
33.95 0.273 3.01 0.00719 0.13 0.0452 -0.112 -- 0.0282 7.6 30 1514 -- --
33.31 0.269 2.95 0.521 0.115 -0.29 -- 2.75 0.0598 8.11 30.06 1553 -- --
33.98 0.271 3.01 -0.00266 0.125 0.0455 -- -- 0.0335 7.86 32.4 3360 -- --
34.03 0.272 2.95 0.536 -- -0.312 -- 3.01 0.0606 -- 30 1593 -- --
34.02 0.273 3.01 0.0121 0.126 -- -0.112 -- 0.0271 7.92 -- -- -- --
34.05 0.273 3.01 0.00925 0.126 -- -- -- 0.0273 8.06 -- -- -- --
34.86 0.275 3.01 0.000347 -- 0.0457 -- -- 0.0358 -- 32.29 3340 -- --
33.97 0.271 3.01 -- 0.127 0.0447 -- -- 0.0339 8.07 32.6 3360 -- --
34.92 0.276 3.02 0.0104 -- -- -- -- 0.0288 -- -- -- -- --
34.05 0.273 3.01 -- 0.126 -- -- -- 0.0263 8.05 -- -- -- --
34.86 0.275 3.01 -- -- 0.0479 -- -- 0.0359 -- 32.59 3360 -- --
34.92 0.276 3.02 -- -- -- -- -- 0.0277 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.86 radiation 10.0 10 > th dose independent rect. 6 1
27 28.86 radiation 10.0 10 > th dose dependent rect. 6 1
55 30.56 wind 3.0 30 < th dose dependent rect. 6 1
58 30.67 atmosphere 1005.0 30 > th dose dependent rect. 6 1
61 30.99 humidity 80.0 30 > th dose dependent rect. 6 1
63 31.24 temperature 30.0 30 < th dose dependent rect. 6 1
70 31.53 wind 3.0 30 < th dose independent rect. 6 1
77 31.75 temperature 20.0 30 > th dose independent rect. 6 1
80 31.78 wind 9.0 1440 < th dose independent rect. 7 1
81 31.78 temperature 10.0 1440 > th dose independent rect. 7 1
85 31.78 temperature 30.0 1440 < th dose independent rect. 7 1
89 31.78 humidity 80.0 30 > th dose independent rect. 6 1
90 31.78 humidity 50.0 1440 > th dose independent rect. 7 1
95 31.78 atmosphere 995.0 1440 > th dose independent rect. 7 1
96 31.78 atmosphere 1015.0 1440 < th dose independent rect. 7 1
98 31.78 temperature 10.0 1440 > th dose independent rect. 8 23
104 31.81 temperature 10.0 30 > th dose independent rect. 6 1
106 31.81 temperature 30.0 30 < th dose independent rect. 6 1
107 31.81 humidity 50.0 30 > th dose independent rect. 6 1
110 31.81 humidity 90.0 30 < th dose independent rect. 6 1
111 31.81 atmosphere 995.0 30 > th dose independent rect. 6 1
112 31.81 atmosphere 1005.0 30 > th dose independent rect. 6 1
113 31.81 atmosphere 1015.0 30 < th dose independent rect. 6 1
114 31.81 radiation 20.0 30 < th dose independent rect. 6 1
117 31.81 precipitation 0.1 30 < th dose independent rect. 6 1
118 31.81 temperature 10.0 30 > th dose independent rect. 7 23
119 31.81 precipitation 0.1 30 < th dose dependent rect. 6 1
122 31.83 wind 1.0 30 > th dose independent rect. 6 1
124 31.92 radiation 20.0 10 < th dose dependent rect. 6 1
144 31.98 temperature 10.0 30 > th dose dependent rect. 6 1
178 32.19 wind 1.0 10 < th dose independent rect. 2 1
180 32.21 atmosphere 1015.0 30 < th dose dependent rect. 2 1
183 32.25 wind 3.0 10 < th dose dependent rect. 2 1
184 32.27 wind 9.0 30 < th dose independent rect. 3 23
189 32.28 wind 9.0 30 < th dose independent rect. 2 1
190 32.28 temperature 10.0 30 > th dose independent rect. 2 1
192 32.28 temperature 25.0 30 < th dose independent rect. 2 1
194 32.28 humidity 50.0 30 > th dose independent rect. 2 1
198 32.28 atmosphere 995.0 30 > th dose independent rect. 2 1
199 32.28 atmosphere 1010.0 30 < th dose independent rect. 2 1
202 32.28 radiation 1.0 30 < th dose independent rect. 2 1
207 32.28 precipitation 0.1 30 < th dose independent rect. 2 1
220 32.28 temperature 10.0 30 > th dose independent rect. 3 23
224 32.28 radiation 1.0 30 < th dose dependent rect. 2 1
229 32.28 precipitation 0.1 30 < th dose dependent rect. 2 1
232 32.29 temperature 10.0 30 > th dose dependent rect. 2 1
234 32.29 humidity 50.0 30 > th dose dependent rect. 2 1
247 32.32 temperature 30.0 30 < th dose dependent rect. 2 1
248 32.32 atmosphere 1005.0 30 > th dose dependent rect. 2 1
251 32.33 wind 9.0 30 < th dose independent rect. 7 23
255 32.34 atmosphere 995.0 30 > th dose dependent rect. 2 1
299 32.45 humidity 90.0 90 < th dose independent rect. 2 5
303 32.49 wind 1.0 30 > th dose independent rect. 2 1
307 32.53 atmosphere 1000.0 90 > th dose independent rect. 7 23
310 32.56 atmosphere 995.0 720 > th dose independent rect. 7 8
314 32.57 atmosphere 1005.0 10 > th dose dependent rect. 2 6
316 32.58 atmosphere 1015.0 30 < th dose dependent rect. 6 1
320 32.61 precipitation 0.1 30 < th dose independent rect. 7 23
321 32.61 precipitation 0.1 30 < th dose dependent rect. 7 23
322 32.62 wind 1.0 30 < th dose independent rect. 10 1
323 32.62 temperature 10.0 1440 > th dose independent rect. 11 1
327 32.62 atmosphere 995.0 1440 > th dose independent rect. 11 1
330 32.62 precipitation 0.1 1440 < th dose independent rect. 11 1
331 32.62 temperature 10.0 1440 > th dose independent rect. 12 23
334 32.62 wind 1.0 30 < th dose dependent rect. 10 1
336 32.62 precipitation 0.1 1440 < th dose dependent rect. 11 1
341 32.65 atmosphere 995.0 10 > th dose independent rect. 3 23
344 32.66 humidity 90.0 10 < th dose dependent rect. 6 1
351 32.68 wind 9.0 4320 > th dose dependent rect. 13 1
354 32.72 precipitation 0.1 720 < th dose independent rect. 15 16
355 32.72 precipitation 0.1 720 < th dose dependent rect. 15 16
359 32.75 humidity 70.0 30 < th dose independent rect. 10 1
360 32.75 precipitation 0.1 720 < th dose independent rect. 19 8
361 32.75 temperature 25.0 30 > th dose dependent rect. 10 1
363 32.75 precipitation 0.1 720 < th dose dependent rect. 19 8
364 32.76 radiation 10.0 30 > th dose independent sin 11 NA
366 32.77 atmosphere 1010.0 30 < th dose independent rect. 10 1
367 32.77 wind 9.0 720 < th dose independent rect. 19 8
371 32.79 radiation 40.0 30 < th dose independent rect. 10 1
373 32.80 temperature 10.0 720 > th dose independent rect. 7 8
374 32.80 temperature 10.0 720 > th dose independent rect. 19 8
375 32.80 temperature 30.0 720 < th dose independent rect. 19 8
376 32.80 humidity 50.0 720 > th dose independent rect. 19 8
377 32.80 atmosphere 995.0 720 > th dose independent rect. 19 8
378 32.80 atmosphere 1015.0 720 < th dose independent rect. 7 8
379 32.80 radiation 1.0 720 < th dose independent rect. 19 8
384 32.80 temperature 10.0 720 > th dose independent rect. 3 16
385 32.80 temperature 10.0 720 > th dose independent rect. 15 16
387 32.80 radiation 1.0 720 < th dose dependent rect. 19 8
400 32.83 atmosphere 1005.0 30 > th dose independent rect. 10 1
403 32.84 temperature 25.0 30 > th dose independent rect. 10 1
407 32.84 humidity 70.0 30 < th dose dependent rect. 10 1
410 32.85 radiation 20.0 30 > th dose independent rect. 10 1
415 32.86 atmosphere 1000.0 30 > th dose dependent rect. 10 1
454 32.91 temperature 30.0 30 < th dose independent rect. 10 1
458 32.91 wind 5.0 30 < th dose dependent rect. 10 1
459 32.91 radiation 40.0 30 < th dose dependent rect. 10 1
460 32.92 humidity 60.0 30 > th dose independent rect. 10 1
477 32.94 temperature 10.0 30 > th dose independent rect. 10 1
483 32.94 humidity 90.0 30 < th dose independent rect. 10 1
492 32.94 precipitation 0.1 30 < th dose independent rect. 10 1
494 32.94 temperature 10.0 30 > th dose independent rect. 11 23
497 32.94 precipitation 0.1 30 < th dose dependent rect. 10 1
500 32.95 wind 1.0 30 > th dose independent rect. 10 1
502 32.95 radiation 40.0 720 < th dose independent rect. 15 16
519 33.00 atmosphere 1005.0 270 > th dose dependent rect. 3 1
522 33.01 radiation 1.0 270 < th dose independent rect. 9 4
532 33.01 atmosphere 995.0 720 > th dose independent rect. 3 16
534 33.01 radiation 1.0 270 < th dose dependent rect. 9 4
536 33.02 radiation 1.0 30 > th dose dependent rect. 10 1
539 33.03 precipitation 0.1 720 < th dose independent rect. 7 8
542 33.03 precipitation 0.1 720 < th dose dependent rect. 7 8
543 33.04 humidity 70.0 1440 > th dose independent rect. 10 1
548 33.05 wind 9.0 4320 > th dose independent rect. 13 1
550 33.06 humidity 70.0 1440 < th dose independent rect. 10 1
555 33.06 humidity 50.0 30 > th dose dependent rect. 10 1
556 33.07 wind 3.0 270 > th dose independent rect. 3 1
557 33.07 wind 9.0 4320 < th dose independent rect. 13 1
559 33.07 radiation 1.0 10 > th dose independent rect. 8 22
569 33.09 wind 1.0 30 > th dose dependent rect. 6 1
578 33.10 wind 9.0 720 < th dose independent rect. 15 16
580 33.10 humidity 50.0 30 > th dose independent rect. 7 23
585 33.10 humidity 90.0 90 < th dose dependent rect. 2 5
589 33.10 radiation 1.0 90 < th dose dependent rect. 9 7
596 33.11 atmosphere 1015.0 720 < th dose independent rect. 3 16
613 33.13 wind 1.0 30 > th dose dependent rect. 10 1
619 33.14 temperature 30.0 720 < th dose independent rect. 19 16
620 33.14 atmosphere 1015.0 30 < th dose dependent rect. 10 1
625 33.14 atmosphere 995.0 10 > th dose dependent rect. 8 22
630 33.15 radiation 1.0 90 > th dose independent rect. 7 12
641 33.15 wind 1.0 14400 < th dose dependent rect. 6 1
650 33.16 radiation 30.0 720 > th dose independent rect. 14 19
667 33.18 atmosphere 995.0 720 > th dose independent rect. 15 16
670 33.18 wind 1.0 30 > th dose independent rect. 7 23
676 33.19 atmosphere 995.0 720 > th dose independent rect. 11 8
677 33.19 humidity 80.0 270 > th dose dependent rect. 12 1
681 33.19 radiation 1.0 90 < th dose dependent rect. 13 3
689 33.20 temperature 30.0 30 < th dose independent rect. 7 23
690 33.20 humidity 80.0 4320 > th dose dependent rect. 8 1
717 33.21 humidity 80.0 14400 < th dose dependent rect. 3 6
726 33.22 atmosphere 995.0 720 > th dose independent rect. 7 16
729 33.22 temperature 30.0 270 < th dose independent rect. 9 23
731 33.22 temperature 30.0 14400 > th dose dependent rect. 8 1
741 33.22 radiation 1.0 10 < th dose dependent rect. 11 5
752 33.22 temperature 25.0 720 > th dose dependent rect. 22 11
777 33.23 humidity 80.0 14400 < th dose dependent rect. 21 13
793 33.24 humidity 70.0 14400 > th dose independent rect. 5 5
798 33.24 humidity 70.0 14400 > th dose independent rect. 1 9
804 33.24 wind 9.0 720 < th dose independent rect. 19 16
837 33.25 temperature 30.0 14400 > th dose independent rect. 8 1
838 33.25 humidity 80.0 270 > th dose independent rect. 12 1
845 33.25 humidity 70.0 14400 > th dose independent rect. 7 3
850 33.25 temperature 30.0 4320 < th dose independent rect. 3 6
858 33.25 temperature 30.0 720 < th dose independent rect. 9 12
861 33.25 humidity 70.0 14400 < th dose independent rect. 20 14
871 33.25 humidity 80.0 14400 < th dose dependent rect. 24 10
875 33.26 humidity 70.0 14400 < th dose independent rect. 8 2
887 33.26 precipitation 0.1 720 < th dose independent rect. 9 8
896 33.26 atmosphere 1000.0 10 > th dose independent rect. 8 18
908 33.26 humidity 70.0 4320 > th dose dependent rect. 3 8
910 33.26 precipitation 0.1 720 < th dose dependent rect. 9 8
915 33.27 radiation 20.0 720 > th dose independent sin 12 NA
916 33.27 radiation 10.0 30 < th dose independent sin 11 NA
925 33.27 wind 9.0 720 < th dose independent rect. 7 8
926 33.27 precipitation 0.1 720 < th dose independent rect. 11 8
941 33.27 precipitation 0.1 720 < th dose dependent rect. 11 8
942 33.27 radiation 10.0 720 > th dose dependent rect. 14 19
944 33.28 humidity 80.0 90 < th dose independent rect. 2 1
945 33.28 humidity 90.0 10 < th dose independent rect. 3 1
955 33.28 radiation 1.0 10 < th dose independent rect. 11 5
960 33.28 atmosphere 1000.0 30 > th dose independent rect. 8 11
963 33.28 humidity 80.0 90 < th dose dependent rect. 2 1
964 33.28 humidity 90.0 10 < th dose dependent rect. 3 1
973 33.28 wind 3.0 30 < th dose dependent rect. 6 5
995 33.29 temperature 30.0 1440 > th dose independent rect. 9 7