Os02g0543900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0543900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 465.93 | 1.01 | 5.02 | -2.67 | 1.79 | 0.663 | -2.44 | 3.75 | -1.01 | 19.2 | 26.2 | 1066 | -- | -- |
| 471.97 | 1.01 | 5.04 | -3.24 | 1.85 | 0.845 | -2.5 | -- | -0.895 | 19.3 | 29.42 | 1171 | -- | -- |
| 479.59 | 1.02 | 5.01 | -2.53 | 1.89 | 0.534 | -- | 3.67 | -0.981 | 19.3 | 27 | 1234 | -- | -- |
| 480.8 | 1.02 | 5.12 | -3.39 | 1.85 | 0.944 | -- | -- | -1.17 | 19.3 | 26.51 | 1221 | -- | -- |
| 588.44 | 1.13 | 5.04 | -3.64 | -- | 1.98 | -- | 0.229 | -1.2 | -- | 23.98 | 667 | -- | -- |
| 504.87 | 1.05 | 5.11 | -3.15 | 1.88 | -- | -2.01 | -- | -1.14 | 19.5 | -- | -- | -- | -- |
| 515.67 | 1.06 | 5.11 | -3.11 | 1.87 | -- | -- | -- | -1.14 | 19.7 | -- | -- | -- | -- |
| 583.95 | 1.13 | 5.11 | -3.55 | -- | 2.06 | -- | -- | -1.36 | -- | 24.3 | 676 | -- | -- |
| 760.73 | 1.28 | 5.03 | -- | 1.85 | 1.07 | -- | -- | -0.741 | 19.3 | 35.2 | 1012 | -- | -- |
| 704.61 | 1.24 | 5.07 | -3.13 | -- | -- | -- | -- | -1.17 | -- | -- | -- | -- | -- |
| 770.58 | 1.3 | 5.04 | -- | 1.9 | -- | -- | -- | -0.796 | 19.6 | -- | -- | -- | -- |
| 903.8 | 1.4 | 5.01 | -- | -- | 1.43 | -- | -- | -0.905 | -- | 24.8 | 594 | -- | -- |
| 963.8 | 1.45 | 4.99 | -- | -- | -- | -- | -- | -0.823 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 456.37 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 2 | 456.80 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 3 | 457.06 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 15 |
| 7 | 457.54 | wind | 9.0 | 43200 | > th | dose dependent | sin | 12 | NA |
| 12 | 459.18 | wind | 9.0 | 43200 | > th | dose independent | sin | 11 | NA |
| 18 | 459.73 | humidity | 70.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 21 | 460.03 | wind | 9.0 | 43200 | < th | dose independent | sin | 11 | NA |
| 30 | 461.06 | humidity | 70.0 | 720 | < th | dose independent | rect. | 17 | 14 |
| 54 | 461.96 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 12 |
| 60 | 462.13 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 62 | 462.20 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 8 |
| 70 | 462.31 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 72 | 462.34 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 77 | 462.53 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 19 |
| 80 | 462.65 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 85 | 462.84 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 90 | 463.02 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 102 | 463.29 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 104 | 463.31 | wind | 7.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 105 | 463.32 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 123 | 463.60 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 125 | 463.70 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 6 |
| 127 | 463.72 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 129 | 463.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 133 | 463.77 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 143 | 463.88 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 157 | 464.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 158 | 464.10 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 171 | 464.27 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 183 | 464.41 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 193 | 464.56 | wind | 1.0 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 213 | 464.97 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 5 |
| 233 | 465.25 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 290 | 465.61 | wind | 9.0 | 43200 | < th | dose independent | rect. | 14 | 21 |
| 296 | 465.69 | wind | 1.0 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 337 | 466.15 | temperature | 25.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 339 | 466.16 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 351 | 466.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 362 | 466.52 | humidity | 70.0 | 720 | < th | dose independent | sin | 12 | NA |
| 367 | 466.54 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 14 |
| 382 | 466.58 | humidity | 80.0 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 397 | 466.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 473 | 467.49 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 475 | 467.51 | temperature | 30.0 | 720 | < th | dose independent | sin | 10 | NA |
| 486 | 467.67 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 514 | 467.83 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 515 | 467.86 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 569 | 468.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 575 | 468.25 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 595 | 468.33 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 709 | 468.78 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 720 | 468.81 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 21 | 11 |
| 743 | 468.85 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 748 | 468.86 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 749 | 468.86 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 755 | 468.87 | humidity | 70.0 | 720 | > th | dose independent | sin | 11 | NA |
| 774 | 468.89 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 15 |
| 813 | 468.96 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 891 | 469.05 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 910 | 469.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 915 | 469.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 916 | 469.08 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 8 | NA |