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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os02g0542600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.06 (0.0273) R2 : 0.00724
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.105 (0.0575) R2dN8 : 0.00936 R2N8 : 0.00724
σ : 0.514
deviance : 121.33
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
114.57 0.503 3.08 -0.146 0.214 -0.375 0.36 1.59 0.0892 20.6 1.038 10 -- --
117.03 0.504 3.06 -0.0884 0.204 -0.276 0.333 -- 0.104 20.4 1.052 8 -- --
114.97 0.499 3.08 -0.158 0.218 -0.387 -- 1.58 0.09 20.2 1.031 9 -- --
117.38 0.505 3.06 -0.0989 0.204 -0.278 -- -- 0.104 20.4 1.004 8 -- --
117.47 0.505 3.07 -0.15 -- -0.333 -- 1.45 0.0906 -- 1.021 8 -- --
118.86 0.511 3.06 -0.0586 0.184 -- 0.309 -- 0.098 21.7 -- -- -- --
119.22 0.511 3.06 -0.0706 0.182 -- -- -- 0.0973 21.9 -- -- -- --
119.65 0.509 3.06 -0.0952 -- -0.236 -- -- 0.101 -- 1.076 8 -- --
117.64 0.505 3.06 -- 0.203 -0.265 -- -- 0.11 20.4 1 8 -- --
121.21 0.514 3.06 -0.0686 -- -- -- -- 0.0972 -- -- -- -- --
119.35 0.511 3.06 -- 0.182 -- -- -- 0.105 21.8 -- -- -- --
119.88 0.51 3.06 -- -- -0.225 -- -- 0.111 -- 1.043 8 -- --
121.33 0.514 3.06 -- -- -- -- -- 0.105 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 104.50 wind 9.0 10 > th dose independent rect. 15 1
9 104.50 wind 9.0 10 > th dose dependent rect. 15 1
50 111.09 wind 7.0 270 > th dose dependent rect. 12 1
67 111.94 wind 9.0 30 < th dose independent rect. 3 23
72 112.00 humidity 90.0 10 > th dose dependent rect. 2 1
73 112.01 wind 9.0 270 > th dose dependent rect. 20 20
77 112.09 wind 9.0 270 > th dose independent rect. 19 21
84 112.21 precipitation 0.1 10 < th dose independent rect. 3 23
85 112.21 precipitation 0.1 10 < th dose dependent rect. 3 23
88 112.32 wind 9.0 270 > th dose dependent rect. 1 15
95 112.36 wind 1.0 10 < th dose independent rect. 7 21
97 112.41 temperature 20.0 90 > th dose independent rect. 1 2
107 112.42 wind 1.0 10 < th dose independent rect. 9 19
109 112.46 wind 9.0 270 > th dose independent rect. 1 15
130 112.69 atmosphere 1010.0 10 < th dose dependent rect. 2 1
133 112.84 wind 1.0 10 < th dose independent rect. 2 2
137 112.95 radiation 10.0 1440 < th dose independent rect. 13 2
138 112.96 temperature 20.0 10 > th dose independent rect. 2 1
142 113.06 wind 1.0 10 < th dose independent rect. 2 8
144 113.07 humidity 90.0 10 > th dose independent rect. 2 1
150 113.12 humidity 90.0 720 > th dose dependent rect. 19 2
160 113.17 atmosphere 1000.0 10 > th dose independent rect. 2 1
163 113.20 temperature 10.0 10 > th dose dependent rect. 2 1
165 113.21 wind 9.0 10 < th dose independent rect. 2 1
166 113.21 temperature 10.0 10 > th dose independent rect. 2 1
168 113.21 temperature 30.0 10 < th dose independent rect. 2 1
169 113.21 humidity 50.0 10 > th dose independent rect. 2 1
173 113.21 atmosphere 1010.0 10 < th dose independent rect. 2 1
175 113.21 radiation 1.0 10 < th dose independent rect. 2 1
180 113.21 precipitation 0.1 10 < th dose independent rect. 2 1
181 113.21 temperature 10.0 10 > th dose independent rect. 3 23
182 113.21 radiation 1.0 10 < th dose dependent rect. 2 1
187 113.21 precipitation 0.1 10 < th dose dependent rect. 2 1
200 113.24 atmosphere 1000.0 10 > th dose independent rect. 3 23
204 113.29 wind 9.0 10 < th dose dependent rect. 2 1
207 113.30 wind 5.0 10 < th dose dependent rect. 2 1
212 113.32 temperature 30.0 10 < th dose dependent rect. 2 1
218 113.33 temperature 15.0 90 > th dose dependent rect. 1 2
219 113.34 wind 1.0 30 > th dose independent rect. 2 1
222 113.34 atmosphere 995.0 10 > th dose dependent rect. 2 1
257 113.40 temperature 25.0 90 > th dose dependent rect. 1 1
281 113.49 wind 1.0 10 < th dose independent rect. 2 16
294 113.53 wind 1.0 10 < th dose independent rect. 2 14
329 113.68 radiation 1.0 4320 < th dose dependent rect. 3 1
330 113.69 wind 9.0 1440 < th dose independent rect. 3 1
332 113.69 temperature 10.0 1440 > th dose independent rect. 3 1
335 113.69 temperature 30.0 1440 < th dose independent rect. 3 1
339 113.69 humidity 50.0 1440 > th dose independent rect. 3 1
348 113.69 atmosphere 995.0 1440 > th dose independent rect. 3 1
349 113.69 radiation 1.0 1440 < th dose independent rect. 3 1
373 113.69 temperature 10.0 1440 > th dose independent rect. 4 23
404 113.74 humidity 90.0 10 > th dose independent rect. 5 23
406 113.75 humidity 90.0 720 < th dose independent rect. 19 2
411 113.77 humidity 90.0 30 > th dose independent rect. 24 3
413 113.78 wind 9.0 90 > th dose dependent rect. 14 12
424 113.80 wind 1.0 90 < th dose independent rect. 24 3
439 113.84 wind 9.0 90 > th dose dependent rect. 14 9
451 113.86 wind 9.0 90 > th dose dependent rect. 14 7
468 113.91 humidity 90.0 10 > th dose independent rect. 19 9
479 113.96 radiation 10.0 1440 < th dose independent rect. 9 6
501 114.02 wind 1.0 10 < th dose independent rect. 23 5
502 114.02 wind 1.0 10 > th dose independent rect. 16 23
506 114.02 precipitation 0.1 270 > th dose dependent rect. 2 2
510 114.03 precipitation 0.1 270 > th dose independent rect. 2 2
511 114.03 wind 1.0 10 < th dose independent rect. 21 7
526 114.05 precipitation 0.1 14400 > th dose dependent rect. 18 1
550 114.08 humidity 90.0 10 > th dose independent rect. 11 17
572 114.15 wind 1.0 10 > th dose independent sin 3 NA
597 114.20 humidity 80.0 1440 > th dose independent rect. 11 1
602 114.22 precipitation 0.1 14400 > th dose independent rect. 18 1
603 114.22 precipitation 0.1 14400 < th dose independent rect. 18 1
609 114.22 precipitation 0.1 14400 < th dose dependent rect. 18 1
634 114.26 wind 1.0 10 < th dose independent rect. 11 17
638 114.27 wind 9.0 30 > th dose independent rect. 15 11
672 114.30 humidity 90.0 14400 > th dose independent rect. 13 1
679 114.31 wind 9.0 270 > th dose dependent sin 3 NA
715 114.36 humidity 80.0 14400 > th dose dependent rect. 13 1
737 114.41 humidity 80.0 1440 < th dose independent rect. 11 1
738 114.41 atmosphere 1005.0 30 > th dose independent rect. 15 1
750 114.41 precipitation 0.1 270 > th dose dependent rect. 22 6
761 114.43 radiation 20.0 1440 < th dose dependent rect. 9 6
772 114.44 humidity 90.0 720 > th dose dependent rect. 8 14
775 114.46 precipitation 0.1 14400 < th dose independent rect. 14 2
776 114.46 humidity 70.0 1440 > th dose dependent rect. 11 1
778 114.46 precipitation 0.1 14400 < th dose dependent rect. 14 2
781 114.47 wind 9.0 270 > th dose independent sin 3 NA
782 114.47 precipitation 0.1 270 > th dose independent rect. 20 8
783 114.47 wind 1.0 10 > th dose independent rect. 3 23
795 114.49 precipitation 0.1 14400 > th dose independent rect. 14 2
805 114.49 precipitation 0.1 14400 > th dose dependent rect. 14 2
813 114.51 precipitation 0.1 720 < th dose independent rect. 16 23
814 114.51 precipitation 0.1 720 < th dose dependent rect. 16 23
817 114.52 humidity 80.0 1440 > th dose dependent rect. 10 4
824 114.54 wind 7.0 720 < th dose independent rect. 11 4
858 114.57 precipitation 0.1 720 > th dose independent rect. 18 10
866 114.58 humidity 90.0 30 < th dose independent rect. 16 15
887 114.61 humidity 90.0 720 > th dose independent rect. 19 2
889 114.61 humidity 80.0 1440 < th dose independent rect. 9 5
892 114.61 humidity 50.0 1440 > th dose dependent rect. 7 1
898 114.62 humidity 90.0 1440 < th dose dependent rect. 7 1
925 114.66 humidity 90.0 1440 > th dose independent rect. 10 4
938 114.68 humidity 90.0 10 > th dose independent sin 12 NA
941 114.68 precipitation 0.1 14400 > th dose independent rect. 12 4
951 114.69 radiation 10.0 1440 > th dose independent rect. 14 1
968 114.69 wind 1.0 43200 > th dose independent rect. 21 9
989 114.69 humidity 90.0 1440 < th dose dependent rect. 6 3
990 114.69 radiation 1.0 14400 < th dose dependent rect. 1 3
992 114.70 wind 9.0 270 < th dose independent sin 4 NA