FiT-DB / Search/ Help/ Sample detail

Os02g0542200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : FAR1 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.55 (0.0179) R2 : 0.254
β1 : 0.816 (0.0655) R2dD : 0.263 R2D : 0.248
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.064 (0.0382) R2dN8 : 0.00616 R2N8 : -0.00871
σ : 0.336
deviance : 51.65
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.75 0.256 6.5 1.07 0.526 0.554 -0.314 -0.52 0.203 11.4 29.84 310 -- --
30.03 0.255 6.51 0.975 0.52 0.547 -0.294 -- 0.177 11.3 29.28 320 -- --
30.15 0.256 6.5 1.06 0.515 0.557 -- -0.526 0.203 11.3 29.8 335 -- --
30.37 0.257 6.51 0.962 0.527 0.556 -- -- 0.181 11.3 29.3 317 -- --
40.06 0.295 6.5 1.16 -- 0.834 -- -0.597 0.257 -- 30.38 760 -- --
34.11 0.274 6.53 0.836 0.53 -- -0.322 -- 0.0658 10.2 -- -- -- --
34.52 0.275 6.53 0.823 0.532 -- -- -- 0.0651 10.2 -- -- -- --
40.44 0.296 6.51 1.04 -- 0.826 -- -- 0.225 -- 30 769 -- --
52.13 0.336 6.55 -- 0.523 0.128 -- -- -0.00432 10.3 29.5 301 -- --
51.65 0.336 6.55 0.816 -- -- -- -- 0.064 -- -- -- -- --
52.38 0.339 6.55 -- 0.528 -- -- -- -0.0266 10.1 -- -- -- --
65.93 0.378 6.55 -- -- 0.427 -- -- 0.0351 -- 31.4 722 -- --
69.2 0.388 6.57 -- -- -- -- -- -0.0265 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.49 radiation 20 14400 < th dose independent rect. 2 4
4 28.35 temperature 10 270 > th dose dependent rect. 8 21
6 28.46 wind 9 43200 > th dose independent rect. 19 6
9 28.48 temperature 10 270 > th dose dependent rect. 9 19
10 28.49 wind 9 43200 < th dose independent rect. 18 12
11 28.50 wind 7 43200 > th dose dependent rect. 18 14
14 28.51 humidity 80 43200 > th dose dependent rect. 6 4
25 28.55 humidity 80 43200 > th dose dependent rect. 8 1
27 28.55 wind 9 43200 > th dose dependent rect. 19 7
30 28.57 humidity 90 43200 < th dose independent rect. 5 4
34 28.58 humidity 90 43200 < th dose independent rect. 4 6
49 28.61 radiation 30 4320 < th dose independent rect. 16 17
53 28.62 wind 7 43200 > th dose independent rect. 18 16
55 28.63 wind 9 43200 < th dose independent rect. 19 6
61 28.63 temperature 30 270 < th dose dependent rect. 3 21
65 28.65 humidity 90 43200 < th dose independent rect. 4 8
81 28.68 temperature 30 90 < th dose dependent rect. 5 20
83 28.69 radiation 1 4320 < th dose independent rect. 18 8
88 28.70 wind 7 43200 < th dose independent rect. 18 16
94 28.71 radiation 30 4320 < th dose independent rect. 7 2
95 28.71 radiation 30 4320 < th dose independent rect. 3 6
103 28.71 radiation 30 4320 < th dose independent rect. 18 15
110 28.72 radiation 1 4320 < th dose independent rect. 18 5
134 28.75 wind 7 43200 > th dose independent rect. 1 1
136 28.75 radiation 1 4320 < th dose independent rect. 18 3
139 28.75 radiation 1 4320 < th dose independent rect. 18 12
141 28.75 wind 7 43200 > th dose dependent sin 11 NA
151 28.77 radiation 1 4320 < th dose independent rect. 18 1
156 28.78 wind 7 43200 < th dose independent rect. 1 1
164 28.79 wind 7 43200 > th dose independent sin 10 NA
175 28.80 wind 9 43200 > th dose dependent rect. 24 2
190 28.82 temperature 15 270 > th dose dependent rect. 1 1
204 28.84 wind 7 43200 < th dose independent sin 11 NA
236 28.88 humidity 90 43200 < th dose independent rect. 8 1
248 28.89 wind 7 43200 > th dose independent rect. 9 1
256 28.90 humidity 90 14400 > th dose independent rect. 1 1
258 28.90 radiation 1 4320 > th dose independent rect. 18 1
261 28.90 temperature 20 90 > th dose independent rect. 1 4
281 28.91 radiation 1 4320 > th dose dependent rect. 18 11
292 28.93 humidity 90 43200 > th dose independent rect. 8 1
313 28.95 radiation 1 4320 > th dose independent rect. 18 12
326 28.96 wind 7 43200 < th dose independent rect. 9 1
330 28.96 temperature 15 90 > th dose dependent rect. 1 4
343 28.98 wind 7 43200 > th dose independent rect. 7 3
401 29.01 radiation 30 4320 > th dose dependent rect. 16 17
403 29.02 humidity 90 43200 < th dose independent sin 2 NA
404 29.02 wind 7 43200 < th dose independent rect. 7 3
416 29.03 temperature 15 43200 > th dose independent rect. 5 1
424 29.03 temperature 15 270 > th dose dependent rect. 23 5
428 29.04 temperature 20 270 > th dose independent rect. 1 1
429 29.04 humidity 90 14400 < th dose independent rect. 1 1
443 29.04 radiation 30 4320 > th dose dependent rect. 7 2
465 29.05 radiation 40 14400 < th dose independent rect. 15 11
470 29.05 wind 5 43200 > th dose dependent rect. 9 1
476 29.06 humidity 90 43200 > th dose independent rect. 6 1
482 29.06 radiation 30 4320 > th dose independent rect. 16 17
500 29.07 radiation 40 14400 < th dose independent rect. 15 8
502 29.07 wind 7 43200 > th dose independent rect. 22 13
517 29.08 humidity 90 43200 > th dose independent rect. 5 10
536 29.09 wind 9 43200 < th dose independent rect. 4 2
537 29.09 humidity 90 43200 > th dose independent rect. 6 3
540 29.09 humidity 90 43200 > th dose independent rect. 5 8
546 29.09 wind 7 43200 > th dose independent rect. 24 11
564 29.10 radiation 30 4320 > th dose independent rect. 7 2
585 29.10 wind 5 43200 > th dose independent rect. 1 15
586 29.10 wind 5 43200 < th dose independent rect. 1 15
594 29.10 wind 5 43200 > th dose dependent rect. 6 2
601 29.11 radiation 40 14400 < th dose independent rect. 15 1
607 29.11 humidity 90 14400 < th dose independent rect. 21 5
623 29.11 wind 5 43200 > th dose dependent sin 5 NA
635 29.12 wind 5 43200 < th dose independent sin 3 NA
643 29.12 radiation 40 14400 < th dose independent rect. 15 6
654 29.12 wind 7 43200 < th dose independent rect. 22 13
670 29.12 radiation 10 4320 > th dose dependent rect. 7 1
678 29.13 wind 5 43200 > th dose independent sin 3 NA
686 29.13 wind 7 43200 < th dose independent rect. 24 11
694 29.13 wind 5 43200 > th dose independent rect. 22 21
733 29.14 wind 5 43200 > th dose independent rect. 17 23
734 29.14 radiation 1 4320 > th dose dependent rect. 18 1
743 29.14 temperature 15 270 > th dose dependent rect. 22 7
793 29.15 wind 5 43200 < th dose independent rect. 17 23
797 29.15 radiation 1 4320 < th dose dependent rect. 18 12
828 29.16 wind 5 43200 > th dose independent rect. 15 23
836 29.16 wind 5 43200 > th dose dependent rect. 23 15
896 29.18 humidity 80 43200 < th dose independent rect. 16 4
898 29.18 temperature 20 270 > th dose independent rect. 23 5
926 29.18 wind 5 43200 < th dose independent rect. 13 23
935 29.18 radiation 1 4320 > th dose dependent rect. 18 15
941 29.19 wind 5 43200 > th dose independent no NA NA
964 29.19 wind 5 43200 > th dose independent rect. 6 23
978 29.20 wind 5 43200 < th dose independent no NA NA