Os02g0541700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ubiquinol-cytochrome c reductase complex 7.8 kDa protein (EC 1.10.2.2) (Mitochondrial hinge protein) (CR7).
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Os02g0541700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ubiquinol-cytochrome c reductase complex 7.8 kDa protein (EC 1.10.2.2) (Mitochondrial hinge protein) (CR7).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.55 | 0.233 | 12.1 | 0.0365 | 0.22 | 0.499 | 0.153 | 1.02 | -0.164 | 20.1 | 9.951 | 90 | -- | -- |
| 25.79 | 0.237 | 12.1 | 0.0569 | 0.272 | 0.544 | -0.253 | -- | -0.158 | 21.2 | -1.711 | 59 | -- | -- |
| 24.61 | 0.231 | 12.1 | 0.0347 | 0.218 | 0.491 | -- | 0.953 | -0.163 | 19.9 | 10.75 | 90 | -- | -- |
| 25.97 | 0.237 | 12.1 | 0.0576 | 0.264 | 0.498 | -- | -- | -0.157 | 20.7 | -3.24 | 59 | -- | -- |
| 26.73 | 0.241 | 12.1 | 0.0514 | -- | 0.489 | -- | 1.1 | -0.165 | -- | 16.49 | 128 | -- | -- |
| 28.48 | 0.25 | 12.1 | 0.0546 | 0.255 | -- | 0.352 | -- | -0.143 | 16.1 | -- | -- | -- | -- |
| 28.8 | 0.251 | 12.1 | 0.0585 | 0.26 | -- | -- | -- | -0.141 | 16.4 | -- | -- | -- | -- |
| 28.41 | 0.248 | 12.1 | 0.0485 | -- | 0.349 | -- | -- | -0.163 | -- | 8.16 | 170 | -- | -- |
| 26.06 | 0.238 | 12.1 | -- | 0.264 | 0.497 | -- | -- | -0.163 | 20.7 | -2.53 | 59 | -- | -- |
| 32.42 | 0.266 | 12.1 | 0.0482 | -- | -- | -- | -- | -0.147 | -- | -- | -- | -- | -- |
| 28.89 | 0.251 | 12.1 | -- | 0.259 | -- | -- | -- | -0.147 | 16.4 | -- | -- | -- | -- |
| 28.47 | 0.249 | 12.1 | -- | -- | 0.351 | -- | -- | -0.169 | -- | 8.78 | 170 | -- | -- |
| 32.48 | 0.266 | 12.1 | -- | -- | -- | -- | -- | -0.153 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.78 | humidity | 80 | 90 | < th | dose independent | rect. | 23 | 17 |
| 2 | 23.79 | radiation | 1 | 270 | > th | dose dependent | sin | 8 | NA |
| 3 | 23.82 | humidity | 80 | 90 | < th | dose independent | rect. | 1 | 15 |
| 7 | 23.84 | humidity | 60 | 90 | > th | dose dependent | sin | 4 | NA |
| 9 | 23.94 | humidity | 80 | 90 | < th | dose independent | rect. | 3 | 13 |
| 12 | 23.96 | humidity | 80 | 90 | < th | dose independent | sin | 4 | NA |
| 15 | 23.97 | radiation | 40 | 270 | < th | dose dependent | sin | 7 | NA |
| 16 | 23.98 | humidity | 80 | 90 | > th | dose independent | sin | 4 | NA |
| 33 | 24.09 | radiation | 40 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 46 | 24.14 | radiation | 40 | 270 | > th | dose independent | rect. | 9 | 1 |
| 49 | 24.15 | radiation | 40 | 90 | < th | dose dependent | sin | 3 | NA |
| 69 | 24.16 | humidity | 90 | 90 | < th | dose dependent | sin | 6 | NA |
| 72 | 24.17 | radiation | 1 | 90 | > th | dose dependent | sin | 3 | NA |
| 76 | 24.19 | humidity | 80 | 90 | < th | dose independent | rect. | 7 | 9 |
| 77 | 24.19 | radiation | 1 | 90 | > th | dose dependent | rect. | 7 | 9 |
| 81 | 24.21 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 12 |
| 86 | 24.23 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 14 |
| 92 | 24.24 | radiation | 40 | 90 | < th | dose independent | rect. | 9 | 23 |
| 99 | 24.26 | radiation | 40 | 90 | < th | dose independent | rect. | 3 | 16 |
| 107 | 24.27 | radiation | 1 | 90 | > th | dose dependent | rect. | 5 | 11 |
| 130 | 24.31 | radiation | 30 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 133 | 24.31 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 142 | 24.33 | radiation | 40 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 149 | 24.36 | humidity | 80 | 90 | > th | dose independent | rect. | 3 | 16 |
| 157 | 24.38 | radiation | 40 | 270 | < th | dose independent | rect. | 1 | 16 |
| 158 | 24.38 | radiation | 30 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 176 | 24.38 | radiation | 40 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 181 | 24.39 | humidity | 60 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 200 | 24.41 | radiation | 20 | 270 | < th | dose independent | rect. | 1 | 12 |
| 242 | 24.46 | radiation | 20 | 90 | < th | dose independent | rect. | 3 | 16 |
| 245 | 24.46 | humidity | 60 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 247 | 24.46 | humidity | 90 | 90 | < th | dose dependent | rect. | 21 | 18 |
| 250 | 24.47 | radiation | 40 | 10 | < th | dose independent | rect. | 4 | 16 |
| 289 | 24.50 | radiation | 1 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 296 | 24.51 | radiation | 1 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 336 | 24.52 | radiation | 40 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 386 | 24.55 | radiation | 10 | 90 | > th | dose dependent | no | NA | NA |
| 388 | 24.55 | temperature | 20 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 512 | 24.57 | radiation | 10 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 513 | 24.58 | radiation | 20 | 270 | > th | dose independent | sin | 8 | NA |
| 522 | 24.58 | radiation | 10 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 531 | 24.59 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 8 |
| 712 | 24.65 | radiation | 20 | 270 | < th | dose independent | sin | 7 | NA |
| 733 | 24.66 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 10 |
| 797 | 24.69 | humidity | 70 | 270 | > th | dose dependent | rect. | 1 | 15 |
| 822 | 24.71 | radiation | 40 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 843 | 24.73 | radiation | 10 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 844 | 24.74 | radiation | 40 | 270 | > th | dose independent | sin | 11 | NA |
| 855 | 24.75 | radiation | 20 | 90 | < th | dose independent | rect. | 9 | 23 |
| 884 | 24.76 | radiation | 10 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 885 | 24.76 | radiation | 40 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 923 | 24.78 | radiation | 40 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 926 | 24.79 | radiation | 40 | 90 | < th | dose independent | sin | 6 | NA |
| 988 | 24.82 | radiation | 20 | 90 | < th | dose independent | rect. | 3 | 10 |
| 992 | 24.82 | radiation | 40 | 90 | < th | dose dependent | no | NA | NA |