Os02g0541000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0541000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 187.75 | 0.644 | 3.88 | 0.659 | 0.366 | 1.06 | 0.418 | 1.09 | -0.765 | 15.5 | 0.4052 | 11833 | -- | -- |
| 187.98 | 0.639 | 3.89 | 0.638 | 0.362 | 1.17 | 0.391 | -- | -0.792 | 15.6 | 1.014 | 12109 | -- | -- |
| 187.98 | 0.639 | 3.88 | 0.664 | 0.379 | 1.09 | -- | 0.714 | -0.764 | 15.2 | 0.7484 | 12109 | -- | -- |
| 188.33 | 0.639 | 3.88 | 0.65 | 0.366 | 1.17 | -- | -- | -0.792 | 15.2 | 1.135 | 12177 | -- | -- |
| 195.53 | 0.651 | 3.88 | 0.66 | -- | 1.09 | -- | 0.733 | -0.772 | -- | 0.8348 | 12182 | -- | -- |
| 224.03 | 0.702 | 3.83 | 0.587 | 0.354 | -- | 0.502 | -- | -0.557 | 15.7 | -- | -- | -- | -- |
| 224.67 | 0.702 | 3.83 | 0.595 | 0.355 | -- | -- | -- | -0.554 | 15.2 | -- | -- | -- | -- |
| 195.94 | 0.652 | 3.89 | 0.642 | -- | 1.16 | -- | -- | -0.8 | -- | 1.234 | 12182 | -- | -- |
| 197.25 | 0.654 | 3.9 | -- | 0.344 | 1.12 | -- | -- | -0.878 | 15.1 | 0.0001059 | 12184 | -- | -- |
| 231.85 | 0.711 | 3.83 | 0.58 | -- | -- | -- | -- | -0.563 | -- | -- | -- | -- | -- |
| 234 | 0.716 | 3.85 | -- | 0.343 | -- | -- | -- | -0.62 | 15.2 | -- | -- | -- | -- |
| 204.54 | 0.666 | 3.9 | -- | -- | 1.12 | -- | -- | -0.876 | -- | 0.5 | 12300 | -- | -- |
| 240.72 | 0.724 | 3.85 | -- | -- | -- | -- | -- | -0.628 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 184.37 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 4 | 184.97 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 11 | 185.54 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 2 |
| 19 | 185.87 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 29 | 186.34 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 31 | 186.36 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 36 | 186.49 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 37 | 186.53 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 38 | 186.53 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 42 | 186.65 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 45 | 186.70 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 5 |
| 49 | 186.76 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 60 | 186.93 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 71 | 187.18 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 8 |
| 87 | 187.51 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 11 |
| 99 | 187.70 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 108 | 187.78 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 24 | 11 |
| 111 | 187.81 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 8 |
| 116 | 187.85 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 24 | 13 |
| 118 | 187.88 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 2 | 9 |
| 120 | 187.89 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 2 | 9 |
| 122 | 187.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 155 | 188.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 19 |
| 188 | 188.39 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 16 |
| 222 | 188.65 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 234 | 188.74 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 261 | 188.88 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 265 | 188.88 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 15 |
| 266 | 188.89 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 269 | 188.93 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 15 |
| 272 | 188.93 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 15 |
| 277 | 188.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 15 |
| 284 | 189.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 288 | 189.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 290 | 189.03 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 5 |
| 296 | 189.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 303 | 189.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 307 | 189.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 311 | 189.11 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 10 |
| 316 | 189.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 317 | 189.13 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 318 | 189.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 319 | 189.13 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 331 | 189.18 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 17 |
| 335 | 189.18 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 17 |
| 337 | 189.20 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 17 |
| 343 | 189.24 | wind | 1.0 | 14400 | > th | dose dependent | sin | 7 | NA |
| 351 | 189.26 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 15 |
| 361 | 189.29 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 391 | 189.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 417 | 189.48 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 9 |
| 433 | 189.56 | wind | 9.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 440 | 189.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 443 | 189.61 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 463 | 189.66 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 467 | 189.67 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 473 | 189.69 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 497 | 189.77 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 499 | 189.77 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 9 |
| 515 | 189.81 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 517 | 189.81 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 533 | 189.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 535 | 189.86 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 536 | 189.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 543 | 189.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 594 | 189.98 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 604 | 190.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 615 | 190.05 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 619 | 190.06 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 621 | 190.06 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 633 | 190.09 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 662 | 190.16 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 11 |
| 668 | 190.17 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 12 |
| 671 | 190.17 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 720 | 190.25 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 763 | 190.34 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 852 | 190.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 21 |
| 855 | 190.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 862 | 190.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 21 |
| 867 | 190.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 21 |
| 882 | 190.58 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 889 | 190.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 892 | 190.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 19 |
| 894 | 190.60 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 903 | 190.61 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 4 |
| 972 | 190.75 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 977 | 190.75 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 21 |