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Os02g0539600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Homeodomain-like containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.1 (0.0235) R2 : 0.891
β1 : -- (--) R2dD : -- R2D : --
β2 : 4.7 (0.0777) R2dC : 1.45 R2C : 0.387
β3 : 2.31 (0.0652) R2dE : 0.496 R2E : -0.572
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.216 (0.0496) R2dN8 : 0.00587 R2N8 : 0.01
σ : 0.442
deviance : 90.01
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_____
C
peak time of C : 16.2
E
wheather : radiation
threshold : 5.42
memory length : 11
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 3.71
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
88.5 0.442 13.1 0.217 4.68 2.24 -0.346 -0.399 -0.193 16.3 5.132 11 3.55 --
88.86 0.439 13.1 0.215 4.71 2.3 0.0198 -- -0.191 16.2 5.328 13 3.72 --
88.62 0.438 13.1 0.215 4.67 2.25 -- -0.216 -0.198 16.3 5.26 11 3.66 --
88.83 0.439 13.1 0.209 4.67 2.25 -- -- -0.198 16.3 5.26 11 3.66 --
129.96 0.531 13.1 0.0985 -- -3.58 -- 0.434 -0.366 -- 84.98 278 1.48 --
146.26 0.567 13.2 0.183 3.59 -- -0.311 -- -0.295 18.2 -- -- -- --
146.5 0.567 13.2 0.186 3.59 -- -- -- -0.296 18.2 -- -- -- --
127.78 0.526 13.1 0.199 -- -3.67 -- -- -0.319 -- 46.68 377 2.09 --
90.01 0.442 13.1 -- 4.7 2.31 -- -- -0.216 16.2 5.42 11 3.71 --
813.85 1.33 13.1 0.0873 -- -- -- -- -0.375 -- -- -- -- --
147.42 0.568 13.2 -- 3.58 -- -- -- -0.317 18.2 -- -- -- --
128.51 0.528 13.1 -- -- -3.64 -- -- -0.353 -- 52.19 367 2.02 --
814.05 1.33 13.1 -- -- -- -- -- -0.385 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 78.79 temperature 15.0 270 > th dose dependent rect. 3 4
3 79.83 temperature 10.0 270 > th dose dependent rect. 2 6
6 82.08 temperature 15.0 270 > th dose dependent rect. 4 2
8 83.71 wind 7.0 270 < th dose dependent rect. 3 4
12 84.20 wind 3.0 270 < th dose independent rect. 3 4
19 85.41 temperature 15.0 10 > th dose dependent rect. 5 4
31 86.88 precipitation 0.1 270 < th dose independent rect. 3 4
32 86.88 precipitation 0.1 270 < th dose dependent rect. 3 4
37 87.44 wind 9.0 270 < th dose dependent rect. 2 6
38 87.63 temperature 20.0 90 > th dose independent rect. 4 5
41 88.19 wind 5.0 270 < th dose independent rect. 2 6
43 88.27 precipitation 0.1 270 < th dose independent rect. 2 6
45 88.27 precipitation 0.1 270 < th dose dependent rect. 2 6
46 88.28 wind 9.0 270 < th dose independent rect. 7 20
50 88.75 radiation 20.0 270 < th dose independent rect. 3 4
52 88.82 wind 7.0 270 < th dose dependent rect. 4 2
55 88.91 humidity 70.0 270 > th dose independent rect. 3 4
58 88.95 temperature 10.0 270 > th dose independent rect. 3 4
60 88.95 temperature 30.0 270 < th dose independent rect. 3 4
61 88.95 humidity 50.0 270 > th dose independent rect. 3 4
63 88.95 atmosphere 995.0 270 > th dose independent rect. 3 4
64 88.95 atmosphere 1015.0 270 < th dose independent rect. 3 4
66 88.95 temperature 10.0 270 > th dose independent rect. 7 20
82 89.61 wind 9.0 90 < th dose independent rect. 9 19
88 89.72 precipitation 0.1 270 < th dose independent rect. 7 20
89 89.72 precipitation 0.1 270 < th dose dependent rect. 7 20
90 89.73 humidity 50.0 270 > th dose dependent rect. 3 4
91 89.74 radiation 20.0 270 < th dose independent rect. 2 7
93 89.79 radiation 40.0 270 < th dose dependent rect. 3 4
96 89.85 radiation 40.0 270 < th dose dependent rect. 2 7
106 90.15 temperature 10.0 90 > th dose independent rect. 9 19
111 90.27 temperature 10.0 270 > th dose independent rect. 2 6
113 90.27 temperature 30.0 270 < th dose independent rect. 2 6
114 90.27 humidity 50.0 270 > th dose independent rect. 2 6
116 90.27 atmosphere 995.0 270 > th dose independent rect. 2 6
117 90.27 atmosphere 1015.0 270 < th dose independent rect. 2 6
132 90.71 wind 3.0 270 < th dose independent rect. 4 2
135 90.75 precipitation 0.1 270 < th dose independent rect. 8 18
136 90.75 precipitation 0.1 270 < th dose dependent rect. 8 18
138 90.88 precipitation 0.1 270 < th dose independent rect. 3 17
139 90.88 precipitation 0.1 270 < th dose dependent rect. 3 17
157 91.44 humidity 50.0 270 > th dose dependent rect. 2 7
169 91.84 wind 9.0 270 < th dose independent rect. 20 7
171 91.88 temperature 10.0 270 > th dose independent rect. 20 7
172 91.88 temperature 30.0 270 < th dose independent rect. 20 7
173 91.88 humidity 50.0 270 > th dose independent rect. 20 7
176 91.88 atmosphere 995.0 270 > th dose independent rect. 20 7
177 91.88 radiation 1.0 270 < th dose independent rect. 20 7
182 91.88 temperature 10.0 270 > th dose independent rect. 3 17
183 91.88 atmosphere 1015.0 270 < th dose independent rect. 3 17
185 91.88 radiation 1.0 270 < th dose dependent rect. 20 7
191 91.90 radiation 1.0 10 < th dose dependent sin 9 NA
199 92.06 precipitation 0.1 270 < th dose independent rect. 16 15
201 92.06 precipitation 0.1 270 < th dose dependent rect. 16 15
205 92.13 precipitation 0.1 270 < th dose independent rect. 20 7
207 92.13 precipitation 0.1 270 < th dose dependent rect. 20 7
209 92.17 wind 9.0 270 < th dose independent rect. 7 9
218 92.36 radiation 1.0 30 > th dose independent rect. 5 4
246 92.57 precipitation 0.1 270 < th dose independent rect. 2 19
247 92.57 precipitation 0.1 270 < th dose dependent rect. 2 19
269 92.70 radiation 30.0 270 < th dose independent rect. 16 15
272 92.77 precipitation 0.1 270 < th dose independent rect. 7 9
273 92.77 precipitation 0.1 270 < th dose dependent rect. 7 9
274 92.78 temperature 10.0 270 > th dose independent rect. 7 9
275 92.78 atmosphere 1015.0 270 < th dose independent rect. 7 9
276 92.78 temperature 10.0 270 > th dose independent rect. 16 15
279 92.79 temperature 15.0 270 > th dose independent rect. 2 19
287 93.04 radiation 10.0 270 < th dose independent rect. 4 2
289 93.06 wind 9.0 270 < th dose independent rect. 6 22
296 93.17 radiation 1.0 10 < th dose dependent rect. 22 10
304 93.29 wind 9.0 270 < th dose independent rect. 21 5
306 93.33 temperature 10.0 270 > th dose independent rect. 21 5
307 93.33 temperature 30.0 270 < th dose independent rect. 21 5
308 93.33 humidity 50.0 270 > th dose independent rect. 21 5
311 93.33 atmosphere 995.0 270 > th dose independent rect. 21 5
312 93.33 radiation 1.0 270 < th dose independent rect. 21 5
318 93.33 radiation 1.0 270 < th dose dependent rect. 21 5
323 93.34 radiation 1.0 30 > th dose independent sin 10 NA
328 93.42 atmosphere 1010.0 270 < th dose independent rect. 4 2
330 93.44 precipitation 0.1 270 < th dose independent rect. 21 5
332 93.44 precipitation 0.1 270 < th dose dependent rect. 21 5
335 93.47 wind 9.0 270 < th dose independent rect. 16 15
345 93.59 radiation 1.0 30 < th dose independent sin 10 NA
352 93.69 wind 9.0 270 < th dose independent rect. 3 17
354 93.70 temperature 10.0 270 > th dose independent rect. 4 2
356 93.70 temperature 30.0 270 < th dose independent rect. 4 2
357 93.70 humidity 50.0 270 > th dose independent rect. 4 2
360 93.70 atmosphere 995.0 270 > th dose independent rect. 4 2
365 93.70 temperature 10.0 270 > th dose independent rect. 6 22
416 93.94 radiation 1.0 10 < th dose independent rect. 22 9
422 93.97 atmosphere 1015.0 270 < th dose independent rect. 2 19
424 94.02 atmosphere 995.0 270 > th dose independent rect. 16 15
428 94.04 atmosphere 995.0 270 > th dose independent rect. 7 8
433 94.20 atmosphere 995.0 90 > th dose independent rect. 9 19
435 94.24 radiation 40.0 270 < th dose dependent rect. 4 2
476 94.54 radiation 30.0 90 < th dose independent rect. 4 7
484 94.63 wind 9.0 270 < th dose independent rect. 22 15
514 94.95 radiation 40.0 270 < th dose dependent rect. 15 16
515 94.96 temperature 10.0 270 > th dose independent rect. 13 9
516 94.96 temperature 10.0 270 > th dose independent rect. 22 15
517 94.96 atmosphere 995.0 270 > th dose independent rect. 22 15
549 95.15 wind 9.0 270 < th dose independent rect. 2 19
552 95.16 atmosphere 995.0 270 > th dose independent rect. 3 17
560 95.29 radiation 1.0 270 > th dose independent rect. 18 12
562 95.39 atmosphere 995.0 270 > th dose independent rect. 7 20
587 95.68 humidity 50.0 270 > th dose dependent rect. 21 5
624 95.93 wind 1.0 270 > th dose independent rect. 7 8
656 96.05 radiation 40.0 90 < th dose independent rect. 4 18
745 96.66 atmosphere 995.0 270 > th dose independent rect. 2 19
747 96.73 wind 1.0 270 > th dose independent rect. 8 18
776 96.86 atmosphere 1015.0 90 < th dose independent rect. 9 19
780 96.88 wind 9.0 270 < th dose independent rect. 13 9
797 96.92 radiation 1.0 270 > th dose independent rect. 5 1
854 97.24 wind 9.0 10 < th dose independent rect. 22 7
855 97.24 temperature 10.0 10 > th dose independent rect. 22 7
856 97.24 temperature 30.0 10 < th dose independent rect. 22 7
857 97.24 humidity 50.0 10 > th dose independent rect. 22 7
860 97.24 atmosphere 995.0 10 > th dose independent rect. 22 7
867 97.24 temperature 10.0 10 > th dose independent rect. 5 17
869 97.24 atmosphere 1015.0 10 < th dose independent rect. 5 17
878 97.29 precipitation 0.1 10 < th dose independent rect. 5 17
880 97.29 precipitation 0.1 10 < th dose dependent rect. 5 17
899 97.52 humidity 50.0 270 > th dose independent rect. 7 20
918 97.66 atmosphere 995.0 90 > th dose dependent rect. 4 5
934 97.71 precipitation 0.1 270 < th dose independent rect. 13 9
937 97.71 precipitation 0.1 270 < th dose dependent rect. 13 9
938 97.73 wind 1.0 270 > th dose independent rect. 13 9
961 97.82 precipitation 0.1 270 < th dose independent rect. 1 21
962 97.82 precipitation 0.1 270 < th dose dependent rect. 1 21
975 97.95 wind 1.0 90 > th dose independent rect. 9 20
986 98.01 wind 7.0 270 < th dose independent rect. 22 3