Os02g0539500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : VQ domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0539500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : VQ domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.4 | 0.391 | 8.89 | 1.89 | 1.05 | 1.24 | 0.33 | -3.72 | 0.585 | 17.1 | 35.1 | 914 | -- | -- |
| 80.52 | 0.418 | 8.98 | 1.18 | 0.952 | 1.12 | 0.0246 | -- | 0.401 | 16.7 | 38.42 | 1187 | -- | -- |
| 69.65 | 0.389 | 8.89 | 1.89 | 1.06 | 1.23 | -- | -3.73 | 0.583 | 17.1 | 48.86 | 900 | -- | -- |
| 78.91 | 0.414 | 8.95 | 1.43 | 1.02 | 1.13 | -- | -- | 0.486 | 16.7 | 28.9 | 7988 | -- | -- |
| 119.07 | 0.508 | 8.87 | 1.89 | -- | 1.4 | -- | -3.2 | 0.596 | -- | 69.05 | 1167 | -- | -- |
| 100.5 | 0.47 | 9.02 | 0.848 | 1.04 | -- | -0.189 | -- | 0.205 | 16.2 | -- | -- | -- | -- |
| 100.59 | 0.47 | 9.02 | 0.846 | 1.04 | -- | -- | -- | 0.204 | 16.3 | -- | -- | -- | -- |
| 131.06 | 0.533 | 8.93 | 1.51 | -- | 1.31 | -- | -- | 0.56 | -- | 30.5 | 8414 | -- | -- |
| 112.57 | 0.494 | 9.02 | -- | 0.962 | 0.655 | -- | -- | 0.194 | 16.5 | 35.37 | 1145 | -- | -- |
| 158.72 | 0.589 | 9.01 | 0.804 | -- | -- | -- | -- | 0.176 | -- | -- | -- | -- | -- |
| 119.45 | 0.511 | 9.04 | -- | 1.02 | -- | -- | -- | 0.11 | 16.3 | -- | -- | -- | -- |
| 161.68 | 0.592 | 9.01 | -- | -- | 0.854 | -- | -- | 0.211 | -- | 67.14 | 1194 | -- | -- |
| 175.8 | 0.619 | 9.03 | -- | -- | -- | -- | -- | 0.0872 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.09 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 20 |
| 13 | 65.65 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 12 |
| 30 | 66.48 | temperature | 30 | 720 | < th | dose dependent | sin | 2 | NA |
| 59 | 67.55 | temperature | 15 | 720 | > th | dose dependent | rect. | 24 | 19 |
| 91 | 68.40 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 105 | 68.68 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 4 |
| 113 | 68.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 11 |
| 149 | 69.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 12 |
| 198 | 69.65 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 22 |
| 274 | 70.24 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 282 | 70.33 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 283 | 70.34 | temperature | 15 | 720 | > th | dose dependent | sin | 2 | NA |
| 286 | 70.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 289 | 70.36 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 303 | 70.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 315 | 70.50 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 326 | 70.55 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 357 | 70.68 | temperature | 20 | 1440 | > th | dose dependent | sin | 19 | NA |
| 427 | 70.93 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 4 |
| 513 | 71.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 627 | 71.49 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 637 | 71.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 733 | 71.77 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 773 | 71.86 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 841 | 72.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 908 | 72.17 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 9 |
| 942 | 72.23 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 7 |