Os02g0538400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0538400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 190.24 | 0.648 | 5 | 3.58 | 3.14 | -1.73 | 0.919 | 3.78 | 1.04 | 18.5 | 20.78 | 1396 | -- | -- |
| 196.84 | 0.653 | 5.07 | 3.45 | 3.16 | -2.17 | 0.687 | -- | 1.09 | 18.5 | 15.2 | 11208 | -- | -- |
| 192.33 | 0.646 | 5 | 3.56 | 3.14 | -1.73 | -- | 3.77 | 1.04 | 18.5 | 20.96 | 1399 | -- | -- |
| 196.68 | 0.653 | 5.05 | 3.28 | 3.18 | -2.24 | -- | -- | 1.07 | 18.5 | 12.12 | 11153 | -- | -- |
| 701.11 | 1.23 | 4.93 | 3.57 | -- | -1.96 | -- | 3.95 | 1.02 | -- | 21.93 | 1341 | -- | -- |
| 275.26 | 0.778 | 5.22 | 1.88 | 3.19 | -- | 0.929 | -- | 0.369 | 18.4 | -- | -- | -- | -- |
| 277.4 | 0.78 | 5.22 | 1.87 | 3.2 | -- | -- | -- | 0.372 | 18.4 | -- | -- | -- | -- |
| 710.89 | 1.24 | 5.07 | 2.38 | -- | -1.65 | -- | -- | 0.682 | -- | 21.82 | 1346 | -- | -- |
| 348.29 | 0.869 | 5.23 | -- | 3.14 | -1.06 | -- | -- | 0.319 | 18.5 | 3.439 | 1266 | -- | -- |
| 808.54 | 1.33 | 5.16 | 1.79 | -- | -- | -- | -- | 0.304 | -- | -- | -- | -- | -- |
| 369.59 | 0.899 | 5.26 | -- | 3.17 | -- | -- | -- | 0.164 | 18.4 | -- | -- | -- | -- |
| 844.46 | 1.35 | 5.17 | -- | -- | -1.09 | -- | -- | 0.231 | -- | 24.4 | 1337 | -- | -- |
| 892.78 | 1.39 | 5.2 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.52 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 2 | 181.94 | radiation | 20 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 7 | 182.67 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 8 | 182.71 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 9 | 182.85 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 7 |
| 23 | 183.14 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 5 |
| 24 | 183.33 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 30 | 183.58 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 49 | 183.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 50 | 183.98 | radiation | 10 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 51 | 184.04 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 58 | 184.11 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 61 | 184.16 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 64 | 184.18 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 94 | 185.03 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 101 | 185.27 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 6 |
| 126 | 185.84 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 130 | 185.87 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 132 | 185.90 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 138 | 186.00 | humidity | 90 | 14400 | < th | dose independent | sin | 12 | NA |
| 139 | 186.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 13 |
| 141 | 186.01 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 165 | 186.51 | humidity | 90 | 14400 | > th | dose dependent | sin | 12 | NA |
| 183 | 186.68 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 185 | 186.72 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 198 | 186.87 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 15 |
| 208 | 187.00 | radiation | 1 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 216 | 187.04 | radiation | 1 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 248 | 187.23 | radiation | 1 | 14400 | < th | dose independent | sin | 10 | NA |
| 252 | 187.27 | radiation | 1 | 14400 | > th | dose independent | sin | 10 | NA |
| 254 | 187.29 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 308 | 187.62 | radiation | 1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 322 | 187.66 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 324 | 187.67 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 369 | 187.85 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 403 | 188.03 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 16 |
| 461 | 188.26 | temperature | 15 | 1440 | > th | dose dependent | sin | 20 | NA |
| 501 | 188.37 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 595 | 188.62 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 670 | 188.82 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 756 | 189.00 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 777 | 189.01 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 16 |
| 810 | 189.13 | humidity | 90 | 14400 | > th | dose independent | sin | 12 | NA |
| 814 | 189.14 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 912 | 189.37 | radiation | 30 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 928 | 189.41 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 962 | 189.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 975 | 189.54 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 2 |