Os02g0537200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0537200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.13 | 0.346 | 8.29 | 1.26 | 1.24 | -0.736 | -0.799 | -1.33 | 0.181 | 22.2 | 23.3 | 2171 | -- | -- |
| 57.35 | 0.353 | 8.3 | 0.884 | 1.25 | -0.719 | -0.48 | -- | 0.134 | 22 | 23.7 | 2692 | -- | -- |
| 55.41 | 0.347 | 8.28 | 1.29 | 1.32 | -0.731 | -- | -1.35 | 0.212 | 22.3 | 22.7 | 1719 | -- | -- |
| 58.01 | 0.355 | 8.33 | 0.764 | 1.3 | -0.781 | -- | -- | 0.0587 | 22 | 23.74 | 2752 | -- | -- |
| 109.05 | 0.486 | 8.31 | 0.986 | -- | -1.33 | -- | -0.949 | -0.0095 | -- | 25.3 | 790 | -- | -- |
| 81.18 | 0.422 | 8.26 | 1.08 | 1.32 | -- | -0.604 | -- | 0.376 | 22.3 | -- | -- | -- | -- |
| 82.65 | 0.426 | 8.26 | 1.11 | 1.32 | -- | -- | -- | 0.377 | 22.3 | -- | -- | -- | -- |
| 106.63 | 0.481 | 8.34 | 0.705 | -- | -1.39 | -- | -- | -0.118 | -- | 25.25 | 804 | -- | -- |
| 67.25 | 0.382 | 8.34 | -- | 1.29 | -0.949 | -- | -- | -0.0645 | 22.2 | 21.8 | 8020 | -- | -- |
| 189.15 | 0.643 | 8.23 | 1.13 | -- | -- | -- | -- | 0.381 | -- | -- | -- | -- | -- |
| 114.94 | 0.501 | 8.29 | -- | 1.33 | -- | -- | -- | 0.254 | 22.4 | -- | -- | -- | -- |
| 118.99 | 0.508 | 8.37 | -- | -- | -1.52 | -- | -- | -0.239 | -- | 25.24 | 813 | -- | -- |
| 222.67 | 0.697 | 8.26 | -- | -- | -- | -- | -- | 0.256 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.99 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 6 | 53.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 7 | 53.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 8 |
| 33 | 53.59 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 56 | 53.80 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 61 | 53.83 | temperature | 25 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 110 | 54.04 | temperature | 20 | 1440 | > th | dose dependent | sin | 9 | NA |
| 132 | 54.11 | temperature | 25 | 4320 | < th | dose dependent | sin | 14 | NA |
| 479 | 54.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 16 | 19 |
| 522 | 54.81 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 559 | 54.87 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 575 | 54.90 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 596 | 54.92 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 23 |
| 606 | 54.94 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 917 | 55.27 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 4 |
| 955 | 55.31 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 21 |
| 976 | 55.33 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 23 |