Os02g0537000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pectinesterase inhibitor domain containing protein.
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Os02g0537000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pectinesterase inhibitor domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.85 | 0.428 | 2.86 | 1.54 | 0.0881 | -0.503 | -0.242 | 24.6 | 0.0394 | 18.8 | 31.21 | 314 | -- | -- |
| 92.77 | 0.449 | 3.03 | -0.0853 | 0.0468 | 2.06 | -0.0176 | -- | 0.0788 | 21.3 | 30.31 | 327 | -- | -- |
| 82.16 | 0.422 | 2.85 | 1.63 | 0.0725 | -0.651 | -- | 26.3 | 0.0372 | 20.2 | 31.36 | 348 | -- | -- |
| 91.97 | 0.447 | 3.05 | -0.1 | 0.0657 | 2.25 | -- | -- | 0.0388 | 21.1 | 31.2 | 322 | -- | -- |
| 82.21 | 0.422 | 2.84 | 1.7 | -- | -0.805 | -- | 28.3 | 0.0444 | -- | 31.5 | 372 | -- | -- |
| 184.77 | 0.637 | 3.1 | 0.162 | 0.667 | -- | 1.14 | -- | -0.121 | 17.9 | -- | -- | -- | -- |
| 187.96 | 0.642 | 3.1 | 0.153 | 0.673 | -- | -- | -- | -0.117 | 17.9 | -- | -- | -- | -- |
| 92.21 | 0.447 | 3.05 | -0.103 | -- | 2.27 | -- | -- | 0.0412 | -- | 31.25 | 325 | -- | -- |
| 92.15 | 0.447 | 3.05 | -- | 0.086 | 2.21 | -- | -- | 0.0487 | 19.1 | 31.21 | 322 | -- | -- |
| 211.46 | 0.679 | 3.09 | 0.133 | -- | -- | -- | -- | -0.132 | -- | -- | -- | -- | -- |
| 188.58 | 0.642 | 3.1 | -- | 0.671 | -- | -- | -- | -0.134 | 17.9 | -- | -- | -- | -- |
| 92.48 | 0.448 | 3.05 | -- | -- | 2.26 | -- | -- | 0.0515 | -- | 31.25 | 325 | -- | -- |
| 211.93 | 0.679 | 3.09 | -- | -- | -- | -- | -- | -0.147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.65 | temperature | 30 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 17 | 86.99 | temperature | 30 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 34 | 87.22 | temperature | 30 | 270 | > th | dose dependent | sin | 21 | NA |
| 39 | 87.46 | temperature | 30 | 270 | > th | dose independent | rect. | 11 | 7 |
| 68 | 87.77 | temperature | 30 | 270 | > th | dose dependent | no | NA | NA |
| 183 | 89.05 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 238 | 91.73 | temperature | 30 | 270 | > th | dose independent | sin | 20 | NA |
| 248 | 93.28 | temperature | 30 | 270 | < th | dose independent | sin | 20 | NA |
| 325 | 96.29 | temperature | 30 | 270 | > th | dose independent | no | NA | NA |
| 455 | 98.14 | temperature | 30 | 270 | < th | dose independent | no | NA | NA |
| 457 | 98.26 | temperature | 30 | 270 | < th | dose independent | rect. | 10 | 13 |
| 458 | 98.45 | temperature | 25 | 10 | > th | dose dependent | sin | 15 | NA |
| 462 | 99.02 | temperature | 30 | 270 | < th | dose independent | rect. | 3 | 23 |
| 475 | 99.88 | temperature | 30 | 270 | < th | dose independent | rect. | 10 | 23 |
| 478 | 100.02 | temperature | 30 | 270 | > th | dose independent | rect. | 16 | 23 |
| 494 | 100.36 | temperature | 30 | 270 | < th | dose independent | rect. | 14 | 23 |
| 522 | 101.28 | temperature | 30 | 270 | < th | dose independent | rect. | 16 | 23 |
| 525 | 101.47 | temperature | 30 | 270 | < th | dose independent | rect. | 12 | 23 |
| 529 | 101.55 | temperature | 30 | 270 | < th | dose independent | rect. | 18 | 23 |
| 564 | 102.03 | temperature | 30 | 10 | > th | dose independent | rect. | 13 | 6 |
| 579 | 102.05 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 23 |
| 618 | 102.64 | temperature | 30 | 720 | > th | dose independent | rect. | 9 | 4 |
| 640 | 102.96 | temperature | 30 | 270 | < th | dose independent | rect. | 8 | 23 |
| 738 | 103.69 | temperature | 30 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 742 | 103.79 | temperature | 30 | 720 | > th | dose dependent | sin | 7 | NA |
| 768 | 104.62 | temperature | 30 | 270 | > th | dose independent | rect. | 15 | 1 |
| 770 | 104.66 | temperature | 30 | 720 | < th | dose independent | rect. | 5 | 8 |
| 790 | 104.88 | temperature | 30 | 720 | > th | dose independent | rect. | 11 | 2 |
| 804 | 105.43 | temperature | 30 | 720 | > th | dose independent | sin | 7 | NA |
| 815 | 105.82 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 9 |
| 881 | 106.57 | temperature | 30 | 720 | < th | dose independent | sin | 7 | NA |
| 886 | 106.71 | temperature | 30 | 720 | < th | dose independent | rect. | 21 | 16 |
| 889 | 106.78 | humidity | 60 | 270 | < th | dose independent | rect. | 12 | 5 |
| 906 | 107.10 | temperature | 30 | 720 | < th | dose independent | rect. | 23 | 15 |
| 950 | 107.49 | temperature | 30 | 720 | < th | dose independent | rect. | 8 | 7 |