Os02g0536500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0536500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 201.08 | 0.666 | 11.3 | 1.36 | 1.82 | -1.71 | 0.301 | -2.49 | 0.722 | 10.2 | 20.57 | 1684 | -- | -- |
| 206.03 | 0.669 | 11.2 | 2.1 | 1.78 | -1.84 | 0.311 | -- | 0.887 | 10.2 | 21.45 | 1685 | -- | -- |
| 200.92 | 0.66 | 11.3 | 1.39 | 1.73 | -1.75 | -- | -2.65 | 0.729 | 10.3 | 20.61 | 1936 | -- | -- |
| 205.69 | 0.668 | 11.2 | 2.1 | 1.63 | -1.9 | -- | -- | 0.89 | 10.3 | 22.29 | 1946 | -- | -- |
| 297.53 | 0.803 | 11.3 | 1.73 | -- | -2.75 | -- | -1.9 | 0.881 | -- | 21.01 | 797 | -- | -- |
| 310.46 | 0.826 | 11.3 | 1.42 | 1.89 | -- | 0.368 | -- | 0.498 | 10.1 | -- | -- | -- | -- |
| 311 | 0.826 | 11.3 | 1.43 | 1.89 | -- | -- | -- | 0.499 | 10.1 | -- | -- | -- | -- |
| 298.42 | 0.805 | 11.3 | 2.16 | -- | -2.84 | -- | -- | 0.973 | -- | 22.23 | 803 | -- | -- |
| 307.24 | 0.816 | 11.3 | -- | 1.73 | -1.3 | -- | -- | 0.601 | 10.2 | 22.79 | 1906 | -- | -- |
| 526.74 | 1.07 | 11.4 | 1.41 | -- | -- | -- | -- | 0.496 | -- | -- | -- | -- | -- |
| 365.2 | 0.894 | 11.4 | -- | 1.88 | -- | -- | -- | 0.339 | 10.1 | -- | -- | -- | -- |
| 411.18 | 0.944 | 11.4 | -- | -- | -2.36 | -- | -- | 0.566 | -- | 23.79 | 792 | -- | -- |
| 579.05 | 1.12 | 11.4 | -- | -- | -- | -- | -- | 0.339 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 197.32 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 5 | 198.06 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 21 | 13 |
| 46 | 198.84 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 10 | NA |
| 125 | 200.06 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 150 | 200.42 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 161 | 200.53 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 167 | 200.60 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 20 | 2 |
| 169 | 200.60 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 171 | 200.64 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 18 | 6 |
| 182 | 200.71 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 256 | 201.32 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 266 | 201.41 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 297 | 201.56 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 298 | 201.57 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 341 | 201.90 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 18 | 17 |
| 391 | 202.19 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 16 |
| 413 | 202.30 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 529 | 202.88 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 574 | 203.03 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 8 | 23 |
| 597 | 203.15 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 610 | 203.21 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 624 | 203.25 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 22 |
| 741 | 203.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 14 |
| 755 | 203.77 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 13 | NA |
| 825 | 203.99 | temperature | 25.0 | 4320 | > th | dose independent | sin | 12 | NA |
| 877 | 204.15 | temperature | 25.0 | 4320 | < th | dose independent | sin | 9 | NA |
| 878 | 204.15 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 881 | 204.16 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 918 | 204.27 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 958 | 204.38 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 17 | 10 |
| 965 | 204.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 14 |