Os02g0534400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cell wall invertase (EC 3.2.1.26).
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Os02g0534400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cell wall invertase (EC 3.2.1.26).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.74 | 0.384 | 12.4 | 0.0472 | 1.58 | 0.53 | -0.0893 | 0.876 | -0.0542 | 10.8 | 1001 | 11728 | -- | -- |
| 66.5 | 0.38 | 12.4 | -0.00477 | 1.59 | 0.689 | 0.0182 | -- | -0.0264 | 10.8 | 999.5 | 11442 | -- | -- |
| 66.62 | 0.38 | 12.4 | 0.0295 | 1.58 | 0.555 | -- | 0.728 | -0.0567 | 10.8 | 1001 | 11669 | -- | -- |
| 66.14 | 0.379 | 12.4 | -0.0115 | 1.58 | 0.756 | -- | -- | -0.0506 | 10.8 | 998.6 | 11429 | -- | -- |
| 220.98 | 0.692 | 12.4 | -0.00723 | -- | 0.711 | -- | 0.106 | -0.0633 | -- | 997.7 | 11768 | -- | -- |
| 78.25 | 0.415 | 12.4 | 0.136 | 1.59 | -- | -0.0959 | -- | -0.119 | 10.9 | -- | -- | -- | -- |
| 78.29 | 0.414 | 12.4 | 0.132 | 1.59 | -- | -- | -- | -0.119 | 10.9 | -- | -- | -- | -- |
| 220.95 | 0.692 | 12.4 | -0.0493 | -- | 0.73 | -- | -- | -0.0639 | -- | 997.6 | 11770 | -- | -- |
| 66.09 | 0.379 | 12.4 | -- | 1.58 | 0.717 | -- | -- | -0.0524 | 10.8 | 998.6 | 11428 | -- | -- |
| 234.88 | 0.716 | 12.5 | 0.0979 | -- | -- | -- | -- | -0.13 | -- | -- | -- | -- | -- |
| 78.75 | 0.415 | 12.4 | -- | 1.59 | -- | -- | -- | -0.134 | 10.9 | -- | -- | -- | -- |
| 221.01 | 0.692 | 12.4 | -- | -- | 0.722 | -- | -- | -0.0595 | -- | 997.7 | 11770 | -- | -- |
| 235.13 | 0.716 | 12.5 | -- | -- | -- | -- | -- | -0.141 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.82 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 2 | 62.82 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 3 | 63.01 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 4 | 63.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 8 | 65.44 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 11 | 65.50 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 2 |
| 12 | 65.52 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 13 | 65.53 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 52 | 65.78 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 4 |
| 88 | 65.79 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 100 | 65.79 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 183 | 66.01 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 203 | 66.11 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 10 | 7 |
| 225 | 66.18 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 228 | 66.19 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 14 |
| 230 | 66.19 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 19 |
| 233 | 66.20 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 19 |
| 237 | 66.21 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 4 | 14 |
| 249 | 66.22 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 24 | 18 |
| 268 | 66.24 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 269 | 66.24 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 23 | NA |
| 280 | 66.24 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 5 | 20 |
| 288 | 66.25 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 296 | 66.25 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 8 | 18 |
| 389 | 66.29 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 12 | 18 |
| 393 | 66.29 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 20 |
| 405 | 66.30 | atmosphere | 1005.0 | 14400 | > th | dose independent | no | NA | NA |
| 440 | 66.31 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 12 | 14 |
| 551 | 66.37 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 5 | 21 |
| 623 | 66.41 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 649 | 66.42 | atmosphere | 1005.0 | 14400 | < th | dose independent | no | NA | NA |
| 704 | 66.46 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 12 | 10 |
| 727 | 66.48 | wind | 5.0 | 720 | < th | dose independent | rect. | 7 | 12 |
| 742 | 66.49 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 23 |
| 794 | 66.56 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 805 | 66.56 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 876 | 66.66 | wind | 5.0 | 720 | < th | dose independent | rect. | 7 | 4 |
| 952 | 66.83 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 982 | 66.89 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |