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Os02g0533700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.08 (0.0531) R2 : 0.61
β1 : 1.19 (0.195) R2dD : 0.0368 R2D : 0.04
β2 : 4.69 (0.215) R2dC : 1.06 R2C : -0.0463
β3 : 2.55 (0.185) R2dE : 0.448 R2E : -0.539
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.08 (0.114) R2dN8 : 0.11 R2N8 : 0.102
σ : 0.971
deviance : 434.32
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C
peak time of C : 19.7
E
wheather : temperature
threshold : 19.71
memory length : 645
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 22.5
open length of G : 5.59

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
403.63 0.944 8.11 0.862 4.56 2.47 0.832 -2.52 1.01 19.8 19.78 655 22.6 5.53
418.45 0.953 8.11 1.24 4.67 2.55 2.28 -- 1.03 19.7 19.71 658 22.5 5.52
404.55 0.937 8.12 0.863 4.54 2.47 -- -2.88 1.02 19.8 19.66 645 22.6 5.62
434.32 0.971 8.08 1.19 4.69 2.55 -- -- 1.08 19.7 19.71 645 22.5 5.59
587.5 1.13 7.85 2.02 -- -2.08 -- -2.31 1.61 -- 7.894 6454 23.7 7.16
566.9 1.12 7.92 1.86 2.41 -- 0.843 -- 1.46 21 -- -- -- --
569.27 1.12 7.92 1.83 2.41 -- -- -- 1.46 21 -- -- -- --
560.42 1.1 7.83 1.96 -- -2.19 -- -- 1.63 -- 8.145 6620 21.7 8
471.33 1.01 8.1 -- 4.9 2.77 -- -- 0.95 19.7 19.6 660 22.5 5.55
902.23 1.4 7.86 1.83 -- -- -- -- 1.44 -- -- -- -- --
657.1 1.2 7.97 -- 2.41 -- -- -- 1.26 21.1 -- -- -- --
645.57 1.18 7.9 -- -- -2.28 -- -- 1.23 -- 2.669 6582 22.3 7.37
990.46 1.47 7.9 -- -- -- -- -- 1.24 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 411.59 temperature 20 720 > th dose independent rect. 22 5
3 413.62 temperature 15 270 > th dose dependent rect. 23 10
13 421.47 temperature 20 720 > th dose independent rect. 21 12
14 422.39 temperature 20 720 > th dose independent rect. 21 10
19 423.43 temperature 20 720 < th dose independent rect. 21 12
23 424.46 temperature 20 720 > th dose independent rect. 19 14
27 425.07 temperature 20 720 > th dose independent sin 10 NA
31 425.54 temperature 20 720 > th dose independent rect. 24 1
48 427.60 temperature 25 720 < th dose dependent rect. 21 11
50 427.74 temperature 20 720 < th dose independent sin 9 NA
54 428.44 temperature 25 720 < th dose dependent rect. 20 14
57 428.51 temperature 25 720 < th dose dependent rect. 22 9
69 429.18 temperature 20 720 > th dose independent rect. 17 16
71 429.22 temperature 15 720 > th dose dependent rect. 22 6
80 429.65 temperature 25 720 < th dose dependent rect. 23 7
97 430.92 temperature 25 720 < th dose dependent sin 9 NA
326 444.12 temperature 25 720 < th dose dependent rect. 3 2
346 444.55 temperature 20 720 > th dose independent rect. 21 21
517 451.70 temperature 25 270 < th dose dependent rect. 7 2
566 452.90 temperature 25 270 < th dose dependent rect. 4 7
591 453.62 temperature 10 720 > th dose dependent sin 10 NA
650 455.56 temperature 20 720 > th dose independent no NA NA
657 455.77 temperature 20 720 > th dose independent rect. 5 23
682 456.56 temperature 20 720 > th dose independent rect. 8 23
692 456.92 temperature 20 720 < th dose independent no NA NA
871 460.73 temperature 20 720 < th dose independent rect. 5 23
885 461.06 temperature 20 720 < th dose independent rect. 3 23