Os02g0532900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycoside hydrolase, family 17 protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0532900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Glycoside hydrolase, family 17 protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 332.86 | 0.857 | 4.94 | -0.758 | 0.935 | 1.62 | 0.0613 | 0.767 | 0.135 | 8.71 | 24.56 | 3441 | -- | -- |
| 333.38 | 0.85 | 4.92 | -0.539 | 0.938 | 1.66 | 0.113 | -- | 0.201 | 8.71 | 24.52 | 3441 | -- | -- |
| 332.86 | 0.85 | 4.94 | -0.758 | 0.933 | 1.62 | -- | 0.776 | 0.133 | 8.71 | 24.56 | 3449 | -- | -- |
| 333.4 | 0.85 | 4.91 | -0.533 | 0.929 | 1.66 | -- | -- | 0.201 | 8.71 | 24.52 | 3449 | -- | -- |
| 377.76 | 0.905 | 4.96 | -0.627 | -- | 1.84 | -- | 0.588 | 0.145 | -- | 24.7 | 3593 | -- | -- |
| 403.03 | 0.941 | 5.02 | -1.17 | 1.07 | -- | 0.11 | -- | -0.28 | 8.87 | -- | -- | -- | -- |
| 403.07 | 0.94 | 5.02 | -1.17 | 1.07 | -- | -- | -- | -0.28 | 8.88 | -- | -- | -- | -- |
| 377.88 | 0.905 | 4.94 | -0.462 | -- | 1.87 | -- | -- | 0.216 | -- | 24.7 | 3592 | -- | -- |
| 339.92 | 0.859 | 4.9 | -- | 0.921 | 1.84 | -- | -- | 0.303 | 8.69 | 24.6 | 3457 | -- | -- |
| 468.69 | 1.01 | 5.05 | -1.17 | -- | -- | -- | -- | -0.272 | -- | -- | -- | -- | -- |
| 438.93 | 0.98 | 4.99 | -- | 1.07 | -- | -- | -- | -0.15 | 8.96 | -- | -- | -- | -- |
| 382.57 | 0.911 | 4.92 | -- | -- | 2.04 | -- | -- | 0.303 | -- | 24.71 | 3592 | -- | -- |
| 504.58 | 1.05 | 5.02 | -- | -- | -- | -- | -- | -0.142 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 323.32 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 3 | 324.80 | temperature | 25 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 7 | 326.46 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 12 | 327.10 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 6 |
| 59 | 330.72 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 71 | 331.28 | temperature | 25 | 4320 | < th | dose independent | sin | 14 | NA |
| 74 | 331.51 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 9 |
| 81 | 331.62 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 82 | 331.65 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 94 | 331.88 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 5 |
| 100 | 331.95 | temperature | 30 | 4320 | < th | dose dependent | rect. | 20 | 5 |
| 119 | 332.17 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 162 | 332.58 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 164 | 332.60 | temperature | 25 | 4320 | > th | dose independent | sin | 14 | NA |
| 181 | 332.71 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 185 | 332.73 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 226 | 333.02 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 236 | 333.08 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 355 | 333.84 | temperature | 30 | 4320 | < th | dose dependent | sin | 14 | NA |
| 406 | 334.20 | temperature | 10 | 4320 | > th | dose dependent | sin | 14 | NA |
| 455 | 334.54 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 640 | 335.41 | temperature | 30 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 643 | 335.42 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 702 | 335.68 | temperature | 30 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 715 | 335.72 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 2 |