Os02g0531200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Bile acid:sodium symporter family protein.
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Os02g0531200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Bile acid:sodium symporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 105.69 | 0.483 | 5.91 | 0.000343 | 0.617 | 0.242 | 1.86 | 5.91 | -0.0269 | 9.3 | 19.21 | 678 | -- | -- |
| 129.96 | 0.535 | 6.04 | -1.17 | 0.493 | 0.609 | 0.437 | -- | -0.305 | 8.17 | 26.23 | 436 | -- | -- |
| 111.69 | 0.492 | 5.96 | -0.346 | 0.545 | 0.315 | -- | 4.72 | -0.144 | 8.25 | 18.46 | 190 | -- | -- |
| 128.43 | 0.528 | 6.06 | -1.22 | 0.524 | 0.705 | -- | -- | -0.393 | 7.42 | 23.19 | 18 | -- | -- |
| 125.6 | 0.525 | 6 | -0.523 | -- | 0.416 | -- | 4.03 | -0.185 | -- | 18.46 | 190 | -- | -- |
| 135.31 | 0.545 | 6.04 | -1.1 | 0.486 | -- | 0.608 | -- | -0.286 | 9.83 | -- | -- | -- | -- |
| 136.63 | 0.547 | 6.04 | -1.07 | 0.489 | -- | -- | -- | -0.286 | 9.5 | -- | -- | -- | -- |
| 141.9 | 0.555 | 6.07 | -1.19 | -- | 0.604 | -- | -- | -0.378 | -- | 22.4 | 2 | -- | -- |
| 164.27 | 0.6 | 6.02 | -- | 0.482 | 0.414 | -- | -- | -0.201 | 8.37 | 24.54 | 18 | -- | -- |
| 150.71 | 0.574 | 6.05 | -1.08 | -- | -- | -- | -- | -0.284 | -- | -- | -- | -- | -- |
| 167.04 | 0.605 | 6.01 | -- | 0.491 | -- | -- | -- | -0.166 | 9.66 | -- | -- | -- | -- |
| 177.19 | 0.622 | 6.03 | -- | -- | 0.406 | -- | -- | -0.194 | -- | 24.6 | 11 | -- | -- |
| 181.33 | 0.629 | 6.03 | -- | -- | -- | -- | -- | -0.165 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.33 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 22 |
| 3 | 105.55 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 25 | 106.06 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 26 | 106.06 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 27 | 106.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 28 | 106.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 23 |
| 34 | 106.29 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 21 |
| 70 | 106.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 16 |
| 77 | 106.84 | temperature | 25 | 720 | > th | dose independent | rect. | 16 | 21 |
| 128 | 107.39 | temperature | 20 | 1440 | > th | dose dependent | sin | 8 | NA |
| 146 | 107.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 8 |
| 162 | 107.74 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 168 | 107.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 234 | 108.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 320 | 108.93 | temperature | 25 | 1440 | < th | dose independent | rect. | 24 | 11 |
| 349 | 109.15 | temperature | 25 | 720 | > th | dose independent | sin | 8 | NA |
| 386 | 109.39 | temperature | 25 | 720 | < th | dose independent | sin | 9 | NA |
| 390 | 109.40 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 10 |
| 398 | 109.42 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 401 | 109.44 | temperature | 25 | 1440 | > th | dose independent | rect. | 23 | 12 |
| 426 | 109.61 | temperature | 25 | 720 | < th | dose independent | no | NA | NA |
| 442 | 109.72 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 451 | 109.82 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 23 |
| 455 | 109.85 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 23 |
| 466 | 109.90 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 23 |
| 475 | 109.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 484 | 109.96 | temperature | 25 | 720 | < th | dose independent | rect. | 20 | 23 |
| 494 | 109.99 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 507 | 110.04 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 509 | 110.05 | temperature | 25 | 720 | > th | dose independent | no | NA | NA |
| 530 | 110.14 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 23 |
| 544 | 110.19 | temperature | 25 | 720 | > th | dose independent | rect. | 22 | 23 |
| 601 | 110.40 | temperature | 25 | 720 | < th | dose independent | rect. | 22 | 23 |
| 642 | 110.55 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 23 |
| 644 | 110.56 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 23 |
| 675 | 110.65 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 689 | 110.70 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 782 | 110.99 | temperature | 20 | 1440 | > th | dose independent | rect. | 14 | 16 |
| 809 | 111.06 | wind | 1 | 43200 | > th | dose independent | sin | 16 | NA |
| 855 | 111.15 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 22 |
| 907 | 111.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 944 | 111.37 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 954 | 111.37 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 22 |
| 979 | 111.41 | wind | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |