Os02g0529700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Acidic ribosomal protein P2a-4 (Fragment).
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Os02g0529700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Acidic ribosomal protein P2a-4 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174.93 | 0.621 | 9.1 | -0.528 | 1.64 | -2.35 | 1.47 | -5.58 | -0.563 | 14.9 | 0.8708 | 1407 | -- | -- |
| 187.89 | 0.638 | 9.19 | -1.04 | 1.63 | -1.21 | 1.05 | -- | -0.663 | 15 | 2.564 | 1373 | -- | -- |
| 180.71 | 0.626 | 9.1 | -0.498 | 1.54 | -2.3 | -- | -5.53 | -0.551 | 15.3 | 0.8302 | 1439 | -- | -- |
| 180.58 | 0.626 | 9.18 | -1.02 | 1.6 | -1.2 | -- | -- | -0.658 | 14.8 | 3.557 | 5619 | -- | -- |
| 187.34 | 0.637 | 9.15 | -0.775 | -- | -2.81 | -- | -4.66 | -0.603 | -- | 0.9993 | 1874 | -- | -- |
| 207.12 | 0.675 | 9.16 | -0.809 | 1.5 | -- | 0.984 | -- | -0.493 | 15.4 | -- | -- | -- | -- |
| 210.19 | 0.679 | 9.16 | -0.791 | 1.5 | -- | -- | -- | -0.488 | 15.3 | -- | -- | -- | -- |
| 192.76 | 0.647 | 9.2 | -1.09 | -- | -2.58 | -- | -- | -0.735 | -- | 2.479 | 1862 | -- | -- |
| 200.82 | 0.66 | 9.17 | -- | 1.31 | -1.18 | -- | -- | -0.628 | 14.2 | 6.616 | 6630 | -- | -- |
| 337.51 | 0.858 | 9.16 | -0.854 | -- | -- | -- | -- | -0.527 | -- | -- | -- | -- | -- |
| 226.66 | 0.704 | 9.14 | -- | 1.52 | -- | -- | -- | -0.4 | 15.3 | -- | -- | -- | -- |
| 223.23 | 0.696 | 9.18 | -- | -- | -2.47 | -- | -- | -0.627 | -- | 3.065 | 1876 | -- | -- |
| 356.76 | 0.882 | 9.14 | -- | -- | -- | -- | -- | -0.433 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.62 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 3 |
| 4 | 161.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 5 | 161.99 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 6 | 162.04 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 7 | 162.04 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 12 | 163.58 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 24 | 164.46 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 29 | 164.71 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 3 |
| 36 | 165.11 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 38 | 165.21 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 42 | 165.30 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 54 | 165.54 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 55 | 165.55 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 57 | 165.58 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 63 | 165.67 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 75 | 165.84 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 151 | 166.71 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 188 | 167.10 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 192 | 167.16 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 193 | 167.16 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 199 | 167.18 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 217 | 167.33 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 239 | 167.53 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 255 | 167.69 | wind | 7.0 | 43200 | < th | dose dependent | sin | 5 | NA |
| 268 | 167.78 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 275 | 167.84 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 276 | 167.84 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 299 | 167.98 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 302 | 167.99 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 360 | 168.28 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 376 | 168.35 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 391 | 168.40 | wind | 1.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 418 | 168.50 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 430 | 168.56 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 440 | 168.57 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 15 |
| 444 | 168.59 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 445 | 168.59 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 454 | 168.62 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 4 |
| 459 | 168.64 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 467 | 168.67 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 472 | 168.68 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 476 | 168.69 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 486 | 168.71 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 4 | 9 |
| 494 | 168.72 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 515 | 168.78 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 517 | 168.78 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 4 | 11 |
| 522 | 168.80 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 529 | 168.81 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 532 | 168.81 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 5 | 8 |
| 533 | 168.82 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 544 | 168.84 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 571 | 168.87 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 589 | 168.90 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 594 | 168.92 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 608 | 168.94 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 616 | 168.96 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 636 | 169.00 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 650 | 169.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 708 | 169.13 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 728 | 169.17 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 20 | 17 |
| 730 | 169.18 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 732 | 169.18 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 804 | 169.31 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 22 |
| 897 | 169.46 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 898 | 169.46 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 917 | 169.49 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 924 | 169.49 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 19 | 10 |
| 936 | 169.51 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 960 | 169.53 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 21 | 16 |