Os02g0527900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os02g0527900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 250.86 | 0.744 | 8.13 | 2.16 | 0.807 | 2.19 | -0.361 | -2.99 | 0.658 | 8.3 | 0.9974 | 4344 | 17.2 | 11.3 |
| 258.16 | 0.748 | 8.13 | 1.74 | 0.866 | 2.06 | -0.141 | -- | 0.574 | 8.23 | 0.86 | 4354 | 16.9 | 11.3 |
| 250.9 | 0.738 | 8.13 | 2.13 | 0.826 | 2.21 | -- | -2.92 | 0.656 | 8.49 | 0.9935 | 4347 | 17.2 | 11.2 |
| 257.95 | 0.748 | 8.13 | 1.75 | 0.822 | 2.03 | -- | -- | 0.59 | 8.42 | 0.8596 | 4354 | 16.9 | 11.3 |
| 272.8 | 0.769 | 8.11 | 2.32 | -- | 2.13 | -- | -2.72 | 0.814 | -- | 0.99 | 5711 | 17.2 | 11.3 |
| 329.76 | 0.851 | 8.17 | 1.9 | 0.649 | -- | -0.508 | -- | 0.365 | 7.17 | -- | -- | -- | -- |
| 330.27 | 0.851 | 8.17 | 1.89 | 0.647 | -- | -- | -- | 0.367 | 7.48 | -- | -- | -- | -- |
| 277.41 | 0.776 | 8.13 | 1.84 | -- | 2.05 | -- | -- | 0.681 | -- | 0.83 | 5691 | 17.1 | 11.6 |
| 311.38 | 0.822 | 8.13 | -- | 0.733 | 2.36 | -- | -- | 0.333 | 8.43 | 0.88 | 4334 | 17.6 | 11.4 |
| 352.65 | 0.877 | 8.18 | 1.9 | -- | -- | -- | -- | 0.378 | -- | -- | -- | -- | -- |
| 424.14 | 0.963 | 8.22 | -- | 0.665 | -- | -- | -- | 0.157 | 7.29 | -- | -- | -- | -- |
| 313.2 | 0.824 | 8.08 | -- | -- | 2.31 | -- | -- | 0.622 | -- | 1.82 | 5741 | 17.4 | 11.9 |
| 447.59 | 0.987 | 8.23 | -- | -- | -- | -- | -- | 0.167 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 240.70 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 3 | 242.13 | wind | 7 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 5 | 242.93 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 7 | 242.95 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 9 | 243.35 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 11 | 243.49 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 4 |
| 12 | 243.49 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 8 |
| 23 | 244.65 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 26 | 245.11 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 42 | 248.32 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 48 | 248.66 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 17 |
| 63 | 249.74 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 12 |
| 68 | 249.99 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 12 |
| 83 | 250.82 | wind | 7 | 43200 | > th | dose dependent | rect. | 16 | 16 |
| 120 | 252.28 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 123 | 252.45 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 12 |
| 128 | 252.58 | wind | 7 | 43200 | > th | dose dependent | rect. | 14 | 19 |
| 147 | 253.21 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 169 | 253.68 | wind | 7 | 43200 | > th | dose dependent | sin | 13 | NA |
| 184 | 253.92 | wind | 7 | 43200 | > th | dose independent | sin | 13 | NA |
| 204 | 254.32 | wind | 7 | 43200 | < th | dose independent | sin | 14 | NA |
| 268 | 255.47 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 270 | 255.50 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 7 |
| 274 | 255.55 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 278 | 255.60 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 314 | 256.16 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 357 | 257.06 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 392 | 257.91 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 432 | 258.50 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 442 | 258.56 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 477 | 258.92 | wind | 5 | 43200 | > th | dose dependent | rect. | 23 | 22 |
| 492 | 259.06 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 15 |
| 519 | 259.18 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 20 |
| 671 | 260.17 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 21 |
| 672 | 260.17 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 674 | 260.20 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 15 |
| 677 | 260.22 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 678 | 260.22 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 21 |
| 710 | 260.37 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 745 | 260.51 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 15 |
| 772 | 260.61 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 19 |
| 779 | 260.64 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 786 | 260.66 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 7 |
| 795 | 260.68 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 802 | 260.71 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 11 |
| 828 | 260.77 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 14 | 2 |
| 837 | 260.80 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 19 |
| 890 | 260.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 23 |
| 894 | 260.98 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 915 | 261.05 | humidity | 80 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 972 | 261.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 997 | 261.27 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 2 |