FiT-DB / Search/ Help/ Sample detail

Os02g0527300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Heat shock transcription factor 31 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.24 (0.0306) R2 : 0.899
β1 : -0.964 (0.112) R2dD : 0.0164 R2D : 0.0104
β2 : 3 (0.0994) R2dC : 0.353 R2C : 0.689
β3 : -2.61 (0.119) R2dE : 0.181 R2E : 0.511
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.524 (0.0654) R2dN8 : 0.0175 R2N8 : 0.0107
σ : 0.573
deviance : 151.34
__
_____
C
peak time of C : 14.6
E
wheather : radiation
threshold : 2.777
memory length : 177
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 21.6
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
144.19 0.564 9.21 -0.997 2.79 -2.73 -1.45 -2.74 -0.459 14.3 2.08 237 22.3 --
154.78 0.579 9.22 -0.912 2.78 -2.72 -0.349 -- -0.472 14.3 3.264 216 22.5 --
149.32 0.569 9.2 -0.958 2.8 -2.74 -- -1.68 -0.445 14.3 2.568 216 22.1 --
151.34 0.573 9.24 -0.964 3 -2.61 -- -- -0.524 14.6 2.777 177 21.6 --
177.33 0.62 9.21 -1.05 -- -4.4 -- -0.825 -0.468 -- 5.084 243 2.69 --
250.99 0.743 9.25 -0.903 4.62 -- 0.674 -- -0.454 15.4 -- -- -- --
252.41 0.744 9.25 -0.89 4.62 -- -- -- -0.45 15.4 -- -- -- --
174.95 0.616 9.23 -0.909 -- -4.45 -- -- -0.475 -- 4.882 266 2.98 --
174.18 0.615 9.22 -- 3.12 -2.56 -- -- -0.41 14.7 3.272 172 21.5 --
1451.78 1.78 9.25 -1.09 -- -- -- -- -0.572 -- -- -- -- --
273.3 0.773 9.23 -- 4.64 -- -- -- -0.351 15.4 -- -- -- --
195.54 0.651 9.2 -- -- -4.43 -- -- -0.37 -- 8.97 246 3.05 --
1482.87 1.8 9.22 -- -- -- -- -- -0.451 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 133.86 radiation 10.0 270 < th dose independent rect. 24 6
2 134.54 temperature 10.0 270 > th dose dependent rect. 1 5
3 134.54 humidity 50.0 270 > th dose dependent rect. 24 6
4 134.95 radiation 10.0 270 < th dose dependent rect. 24 6
5 135.42 precipitation 0.1 270 < th dose independent rect. 6 18
6 135.42 precipitation 0.1 270 < th dose dependent rect. 6 18
8 135.66 atmosphere 1010.0 270 < th dose independent rect. 24 6
12 136.37 precipitation 0.1 270 < th dose independent rect. 5 20
13 136.37 precipitation 0.1 270 < th dose dependent rect. 5 20
14 136.52 temperature 15.0 270 > th dose independent rect. 24 6
16 136.53 temperature 30.0 270 < th dose independent rect. 24 6
17 136.53 humidity 50.0 270 > th dose independent rect. 24 6
20 136.53 atmosphere 995.0 270 > th dose independent rect. 24 6
24 136.53 temperature 10.0 270 > th dose independent rect. 6 18
26 136.56 wind 9.0 270 < th dose independent rect. 24 6
29 137.31 radiation 1.0 270 < th dose independent rect. 1 4
35 137.52 temperature 10.0 270 > th dose independent rect. 1 4
37 137.52 temperature 30.0 270 < th dose independent rect. 1 4
38 137.52 humidity 50.0 270 > th dose independent rect. 1 4
41 137.52 atmosphere 995.0 270 > th dose independent rect. 1 4
42 137.52 atmosphere 1010.0 270 < th dose independent rect. 1 4
47 137.52 temperature 10.0 270 > th dose independent rect. 5 20
48 137.54 humidity 50.0 270 > th dose dependent rect. 1 4
49 137.56 wind 9.0 270 < th dose independent rect. 1 4
50 137.58 wind 9.0 270 < th dose independent rect. 6 18
57 138.59 wind 9.0 270 < th dose independent rect. 5 20
61 139.12 radiation 1.0 270 < th dose independent rect. 1 15
65 139.34 radiation 1.0 270 < th dose dependent rect. 1 16
79 140.48 precipitation 0.1 270 < th dose independent rect. 24 6
80 140.48 precipitation 0.1 270 < th dose dependent rect. 24 6
108 142.00 precipitation 0.1 270 < th dose independent rect. 1 4
109 142.00 precipitation 0.1 270 < th dose dependent rect. 1 4
133 144.14 radiation 20.0 90 < th dose dependent rect. 3 4
150 145.17 precipitation 0.1 270 < th dose independent rect. 20 14
151 145.17 precipitation 0.1 270 < th dose dependent rect. 20 14
152 145.25 wind 9.0 270 < th dose dependent rect. 24 6
155 145.43 wind 1.0 270 > th dose independent rect. 6 18
168 146.31 wind 9.0 270 < th dose dependent rect. 1 4
197 146.56 radiation 10.0 90 < th dose independent rect. 3 4
203 146.78 humidity 50.0 270 > th dose dependent rect. 2 2
206 147.08 atmosphere 1015.0 270 < th dose dependent rect. 1 4
209 147.13 wind 9.0 270 < th dose independent rect. 2 2
210 147.13 temperature 10.0 270 > th dose independent rect. 2 2
212 147.13 temperature 30.0 270 < th dose independent rect. 2 2
213 147.13 humidity 50.0 270 > th dose independent rect. 2 2
216 147.13 atmosphere 995.0 270 > th dose independent rect. 2 2
217 147.13 atmosphere 1010.0 270 < th dose independent rect. 2 2
219 147.13 radiation 1.0 270 < th dose independent rect. 2 2
224 147.13 temperature 10.0 270 > th dose independent rect. 4 22
225 147.13 radiation 1.0 270 < th dose dependent rect. 2 2
230 147.17 humidity 60.0 90 > th dose dependent rect. 3 4
269 147.76 wind 1.0 270 > th dose independent rect. 5 20
275 148.02 radiation 10.0 10 < th dose independent rect. 3 5
279 148.07 atmosphere 995.0 270 > th dose independent rect. 6 18
292 148.15 radiation 1.0 270 < th dose dependent sin 4 NA
297 148.30 atmosphere 1010.0 90 < th dose independent rect. 3 4
317 148.78 radiation 1.0 270 < th dose independent sin 5 NA
318 148.82 humidity 50.0 10 > th dose dependent rect. 3 4
322 148.92 precipitation 0.1 270 < th dose independent rect. 16 9
324 148.92 precipitation 0.1 270 < th dose dependent rect. 16 9
348 149.44 temperature 10.0 270 > th dose independent rect. 10 10
349 149.44 atmosphere 1015.0 270 < th dose independent rect. 10 10
350 149.44 temperature 10.0 270 > th dose independent rect. 20 14
351 149.44 atmosphere 995.0 270 > th dose independent rect. 20 14
371 149.53 wind 9.0 270 < th dose independent rect. 20 14
375 149.60 humidity 50.0 270 > th dose independent rect. 20 14
382 149.81 wind 9.0 10 < th dose independent rect. 3 4
383 149.81 temperature 10.0 10 > th dose independent rect. 3 4
385 149.81 temperature 30.0 10 < th dose independent rect. 3 4
386 149.81 humidity 50.0 10 > th dose independent rect. 3 4
389 149.81 atmosphere 995.0 10 > th dose independent rect. 3 4
390 149.81 atmosphere 1015.0 10 < th dose independent rect. 3 4
394 149.81 temperature 10.0 10 > th dose independent rect. 7 20
401 150.10 wind 9.0 270 < th dose independent rect. 10 10
402 150.12 temperature 30.0 270 < th dose independent rect. 20 14
410 150.27 wind 1.0 270 > th dose independent rect. 1 4
417 150.55 wind 9.0 10 < th dose independent rect. 7 20
418 150.57 precipitation 0.1 270 < th dose independent rect. 5 7
420 150.57 precipitation 0.1 270 < th dose dependent rect. 5 7
424 150.64 precipitation 0.1 10 < th dose independent rect. 7 20
425 150.64 precipitation 0.1 10 < th dose dependent rect. 7 20
436 150.78 atmosphere 995.0 270 > th dose independent rect. 5 20
438 150.83 radiation 1.0 270 > th dose independent sin 5 NA
452 150.87 temperature 10.0 270 > th dose independent rect. 5 7
453 150.87 atmosphere 995.0 270 > th dose independent rect. 5 7
454 150.87 atmosphere 1015.0 270 < th dose independent rect. 5 7
455 150.87 temperature 10.0 270 > th dose independent rect. 12 17
500 151.16 wind 9.0 270 < th dose independent rect. 1 14
501 151.16 atmosphere 1015.0 270 < th dose independent rect. 6 18
509 151.35 wind 9.0 270 < th dose independent rect. 12 17
537 151.57 wind 9.0 270 < th dose dependent rect. 2 2
542 151.67 wind 9.0 270 < th dose independent rect. 5 7
545 151.75 wind 9.0 270 < th dose independent rect. 15 10
550 151.84 radiation 40.0 90 < th dose independent rect. 13 17
564 152.09 wind 9.0 1440 < th dose independent rect. 4 4
565 152.09 temperature 10.0 1440 > th dose independent rect. 4 4
568 152.09 temperature 30.0 1440 < th dose independent rect. 4 4
572 152.09 humidity 50.0 1440 > th dose independent rect. 4 4
577 152.09 atmosphere 995.0 1440 > th dose independent rect. 4 4
578 152.09 atmosphere 1015.0 1440 < th dose independent rect. 4 4
580 152.09 temperature 10.0 1440 > th dose independent rect. 8 20
583 152.11 atmosphere 1015.0 90 < th dose dependent rect. 3 4
602 152.28 temperature 10.0 270 > th dose independent rect. 15 10
603 152.28 temperature 10.0 270 > th dose independent rect. 1 14
604 152.28 atmosphere 1015.0 270 < th dose independent rect. 1 14
612 152.42 radiation 30.0 270 < th dose independent rect. 16 9
620 152.50 atmosphere 995.0 270 > th dose independent rect. 1 14
668 153.11 humidity 50.0 270 > th dose independent rect. 5 7
673 153.29 wind 9.0 30 < th dose dependent rect. 3 4
697 153.78 precipitation 0.1 30 < th dose independent rect. 3 4
698 153.78 precipitation 0.1 30 < th dose dependent rect. 3 4
705 154.07 radiation 1.0 90 > th dose independent rect. 6 7
711 154.16 radiation 40.0 270 < th dose dependent rect. 16 9
715 154.23 temperature 30.0 270 < th dose independent rect. 6 5
716 154.24 precipitation 0.1 270 < th dose independent rect. 10 10
717 154.24 precipitation 0.1 270 < th dose dependent rect. 10 10
719 154.29 temperature 10.0 270 > th dose independent rect. 6 5
720 154.29 atmosphere 995.0 270 > th dose independent rect. 6 5
721 154.29 atmosphere 1015.0 270 < th dose independent rect. 6 5
722 154.29 temperature 10.0 270 > th dose independent rect. 11 19
723 154.31 precipitation 0.1 270 < th dose independent rect. 6 5
725 154.31 precipitation 0.1 270 < th dose dependent rect. 6 5
731 154.34 temperature 30.0 270 < th dose independent rect. 5 7
737 154.46 radiation 10.0 90 < th dose dependent rect. 3 10
748 154.58 wind 9.0 270 < th dose independent rect. 6 5
759 154.63 wind 9.0 270 < th dose independent rect. 11 19
763 154.71 humidity 50.0 270 > th dose independent rect. 6 5
766 154.76 wind 1.0 270 > th dose independent rect. 10 10
772 154.98 temperature 10.0 10 > th dose dependent rect. 3 4
776 155.22 wind 1.0 270 > th dose independent rect. 5 7
798 155.79 temperature 30.0 270 < th dose dependent rect. 6 3
843 156.55 temperature 30.0 270 < th dose dependent rect. 7 1
852 156.78 radiation 10.0 90 < th dose dependent rect. 3 12
856 156.89 atmosphere 995.0 270 > th dose independent rect. 12 17
873 157.12 atmosphere 995.0 10 > th dose independent rect. 7 20
887 157.29 radiation 30.0 1440 < th dose independent rect. 4 3
917 157.67 wind 1.0 270 > th dose independent rect. 20 14
928 157.77 atmosphere 1015.0 270 < th dose independent rect. 5 20
968 158.10 atmosphere 995.0 270 > th dose independent rect. 16 9